PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00742.1.g00270.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 420aa    MW: 45877.5 Da    PI: 11.8883
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00742.1.g00270.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.3e-18102151255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+WvAeIr+p++   r r +lg+f tae+Aa+a+++a++ l+g
  Zmw_sc00742.1.g00270.1.am.mk 102 RYRGVRQRS-WGKWVAEIREPRK---RSRKWLGTFTTAEDAARAYDRAALLLYG 151
                                   59****999.**********954...5**********************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.37E-18102157No hitNo description
PROSITE profilePS5103222.445102159IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-20102159IPR016177DNA-binding domain
SMARTSM003801.5E-37102165IPR001471AP2/ERF domain
PfamPF008476.5E-12102150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-29103158IPR001471AP2/ERF domain
PRINTSPR003674.6E-10103114IPR001471AP2/ERF domain
PRINTSPR003674.6E-10125141IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
LHAHACSLYC TFSLSLRPLY LTTAPLHQAH PPRPPPPSLA RPPQRKAQHH HPSLSPFTHI  60
PAPLPRPMEP NSQQLPAATA AESSCGGGNR SRKGGPENGN FRYRGVRQRS WGKWVAEIRE  120
PRKRSRKWLG TFTTAEDAAR AYDRAALLLY GPRAHLNLTA PPPELLASAQ RASSNAHSST  180
SAPPPLRPIL PRPAAASTNQ RSPAGFQHHH HHQQQVQLHL LAPQLPAQPP PPLYYPSTAT  240
ASTVTTTAQP QEPAVAPLSM APLASASVTE EQALTPDEAA AAAGKQSSGS CRRERGAKVE  300
PAVRGQKKIY IYPRISFAGR FGLAAVSMRP RGGSEILLRS PEYVQCQSPH ACLPPFVTAT  360
AARALLIHSV AGRSLRRHLG RRSIGRSTSR LSRRRCVLVH FFRVLMGTFF ATFLRMRHDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-16103158662ATERF1
3gcc_A2e-16103158662ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133032632