PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00445.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 191aa    MW: 20505.2 Da    PI: 10.2724
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00445.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.56.2e-1358108353
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                                   e +r rrk++N+e+ArrsR+RK++ ++ L   v +L+ +Nk+L   l   +
  Zmw_sc00445.1.g00040.1.am.mk  58 ENRRKRRKESNKESARRSRLRKQQHLDDLNSQVNQLKDQNKQLGAALRLTS 108
                                   5689***************************************86665544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-1053108No hitNo description
SMARTSM003388.7E-1356120IPR004827Basic-leucine zipper domain
PfamPF001703.4E-1058102IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.87558121IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-1060112No hitNo description
CDDcd147022.62E-1861109No hitNo description
PROSITE patternPS0003606378IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MLLLSGPPSS MLGSAITRLV QSFSVVFLYC GTSSGSSLGT RGSRSSSENA VNLQAQMENR  60
RKRRKESNKE SARRSRLRKQ QHLDDLNSQV NQLKDQNKQL GAALRLTSQN LVAVQAQNSV  120
LQTQKMELES RLGSLTEILL YLNAGASTST GPAMNAGILN NGGLAPTGGA CDVLGAGAWN  180
QPVADLYYQC F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16065RKRRKE
27278RRSRLRK
37279RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660520.17e-60PREDICTED: ocs element-binding factor 1-like
TrEMBLA0A0A9GYA32e-64A0A0A9GYA3_ARUDO; Uncharacterized protein
STRINGOB09G13080.13e-59(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276