PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma69g00740.1 | ||||||||
Common Name | ZOSMA_69G00740 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 27984.9 Da PI: 9.0414 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 120.5 | 1.6e-37 | 9 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka...eekewyfFs..krdkkyatgkrknratksgyWkat 86 lppGfrFhPtdeelvv+yL++k+ + +l++ +i++v++++++PwdLp + + e+ke y F + + +++k ++r++ sgyWk+t Zosma69g00740.1 9 LPPGFRFHPTDEELVVQYLRRKALSYPLPA-WIIPDVHLNQYNPWDLPlNsaA--VgcgEKKERYLFNyyRGGGARSNKKVSRRVAGSGYWKST 99 79***************************9.78***************54552..133344466655510555566677788889********* PP NAM 87 gkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128 gk+k ++++ +++++g+k+++vfy g + + ++tdWv+hey+l Zosma69g00740.1 100 GKEKMIVVEpEKQVIGMKRVMVFYGGiKPSVISRTDWVLHEYSL 143 ******99878999**********994555568*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.29E-42 | 5 | 189 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 42.192 | 9 | 189 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.9E-22 | 10 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MENQKVIKLP PGFRFHPTDE ELVVQYLRRK ALSYPLPAWI IPDVHLNQYN PWDLPLNSAA 60 VGCGEKKERY LFNYYRGGGA RSNKKVSRRV AGSGYWKSTG KEKMIVVEPE KQVIGMKRVM 120 VFYGGIKPSV ISRTDWVLHE YSLIVSPKKN SNGDLNAAGF ANNNMLSPTT TSSQVTYTEG 180 WVLCRVFQKK SKVTDMMKKD SNLMESRSSV CNFSNMETEI MESSCVTQDS NKEEEVEDEQ 240 SSITISA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 8e-35 | 7 | 191 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-35 | 7 | 191 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-35 | 7 | 191 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-35 | 7 | 191 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swm_B | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swm_C | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swm_D | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swp_A | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swp_B | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swp_C | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
3swp_D | 9e-35 | 7 | 191 | 18 | 170 | NAC domain-containing protein 19 |
4dul_A | 8e-35 | 7 | 191 | 15 | 167 | NAC domain-containing protein 19 |
4dul_B | 8e-35 | 7 | 191 | 15 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010929607.1 | 5e-53 | NAC domain-containing protein 83 | ||||
TrEMBL | A0A0K9NRH7 | 0.0 | A0A0K9NRH7_ZOSMR; NAC domain protein | ||||
STRING | XP_008791093.1 | 7e-52 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8233 | 30 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-46 | NAC domain containing protein 83 |
Link Out ? help Back to Top | |
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Phytozome | Zosma69g00740.1 |