PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma52g01090.1 | ||||||||
Common Name | ZOSMA_52G01090 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | bZIP | ||||||||
Protein Properties | Length: 142aa MW: 16415.8 Da PI: 10.1115 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.7 | 2.5e-13 | 31 | 80 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r rr+ +NRe+ArrsR RK++ +eeLe v Le eN++ k++ + ++ Zosma52g01090.1 31 RRKRRMTSNRESARRSRMRKQKHVEELEGVVVRLELENREVVKRIGTANQ 80 699***********************************999998877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 26 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-10 | 27 | 76 | No hit | No description |
SMART | SM00338 | 1.5E-16 | 27 | 91 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.162 | 29 | 75 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-11 | 31 | 79 | No hit | No description |
Pfam | PF00170 | 9.2E-11 | 31 | 79 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.93E-14 | 32 | 80 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 34 | 49 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence Send to blast |
MLMGYKPHCQ LERIFSSPSA TTGGSCSDGE RRKRRMTSNR ESARRSRMRK QKHVEELEGV 60 VVRLELENRE VVKRIGTANQ YSLLFNQENH RLRLEQLHLR QRLADVQGIL AFQQELHLDL 120 SMVCSGKDTM NLNGFEQTLF I* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 51 | RRKRRMTSNRESARRSRMRKQK |
2 | 43 | 50 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9NXP1 | 7e-99 | A0A0K9NXP1_ZOSMR; Ocs element-binding factor 1 | ||||
STRING | XP_010273467.1 | 3e-21 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP17765 | 5 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15830.1 | 2e-08 | basic leucine-zipper 3 |
Link Out ? help Back to Top | |
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Phytozome | Zosma52g01090.1 |