PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma44g00270.1
Common NameZOSMA_44G00270
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family EIL
Protein Properties Length: 501aa    MW: 58232.7 Da    PI: 6.7434
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma44g00270.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3430.61.5e-131443901353
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX....................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksn....................ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvY 74 
                      +el++rmwkd+m+l+rlke+k+++++++++++++kk++                    +s++qarrk msraQDgiLkYMlk++evcna+GfvY
  Zosma44g00270.1  44 DELERRMWKDRMRLRRLKEQKRRETQNRKKNINTKKKKnqcetdnenettevvtqkneQSKDQARRKMMSRAQDGILKYMLKMVEVCNAKGFVY 137
                      79***********************999999887777778****************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT-- CS
             EIN3  75 giipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgv 168
                      giipekgkpv+gasd+Lr+WWk+ v+fdrngp  iskyq+++ ++  ++   +++ s++ +l+elqDTtlgSLLsalmqhcdppqrrfplekgv
  Zosma44g00270.1 138 GIIPEKGKPVSGASDNLRGWWKDMVRFDRNGPDVISKYQSEHKLSRVNDVIMSSSVSTPRTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGV 231
                      *********************************************99999989999************************************** PP

                      HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXX CS
             EIN3 169 epPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsa 262
                      +pPWWP+G+e+ww+ lg++k+qg+ppykkphdlkk wkvsvLtavikhm p+i++ir+l+rqsk+lqdkm+akes ++l+v+nqe+ + +++s 
  Zosma44g00270.1 232 PPPWWPNGNEEWWPLLGIPKEQGAPPYKKPHDLKKLWKVSVLTAVIKHMTPDISKIRRLVRQSKCLQDKMTAKESGTWLAVINQED-LSRKLSH 324
                      ***********************************************************************************995.5555544 PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
             EIN3 263 hssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                       +            sc  +     ++++k           +++++rkr++ p+ +++  ++  ++tc ++++++++++l+f+dkn +++++
  Zosma44g00270.1 325 PP---------PSSSCTGE-GI--DDDRK-----------SIDFIRKRQSAPEGDEQQRES--IYTCPNENCPHHDYQLGFHDKNLRNNHQ 390
                      44.........33455533.22..22233...........589*****9888888887655..7*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048735.7E-12444317No hitNo description
Gene3DG3DSA:1.10.3180.109.6E-71191319IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.4E-59197318IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0042742Biological Processdefense response to bacterium
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MEDVCFSDDL DFAQLPVNTS FPACNDPEMM GNDEESEKEE IEVDELERRM WKDRMRLRRL  60
KEQKRRETQN RKKNINTKKK KNQCETDNEN ETTEVVTQKN EQSKDQARRK MMSRAQDGIL  120
KYMLKMVEVC NAKGFVYGII PEKGKPVSGA SDNLRGWWKD MVRFDRNGPD VISKYQSEHK  180
LSRVNDVIMS SSVSTPRTLQ ELQDTTLGSL LSALMQHCDP PQRRFPLEKG VPPPWWPNGN  240
EEWWPLLGIP KEQGAPPYKK PHDLKKLWKV SVLTAVIKHM TPDISKIRRL VRQSKCLQDK  300
MTAKESGTWL AVINQEDLSR KLSHPPPSSS CTGEGIDDDR KSIDFIRKRQ SAPEGDEQQR  360
ESIYTCPNEN CPHHDYQLGF HDKNLRNNHQ FSCSLSPPTT NTFQMMEDKP SVFQNPHDVV  420
PFSLMISGDD RKKMDIDELM IYYDTHHNHH QLQQEPPKFQ IPDDMFLGSF ENQSGYMNCP  480
DLRYDSPFNL TKQDGCNWFY *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-741943221130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-741943221130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15965LKEQKRR
26380KRRETQNRKKNINTKKKK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020086293.11e-159ETHYLENE INSENSITIVE 3-like 1 protein
RefseqXP_020086294.11e-159ETHYLENE INSENSITIVE 3-like 1 protein
RefseqXP_020086296.11e-159ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ9SLH01e-145EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A0K9P3410.0A0A0K9P341_ZOSMR; Ethylene insensitive 3 (Ein3)
STRINGGSMUA_Achr6P15930_0011e-158(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-118ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]