PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma43g00770.1 | ||||||||
Common Name | ZOSMA_43G00770 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | NAC | ||||||||
Protein Properties | Length: 589aa MW: 65300.4 Da PI: 4.4137 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.7 | 1.6e-51 | 17 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l+pGfrFhPtdeelv++yLk+k+ +k +++ ++i+e+d+yk+ePwdLp k ++++++ ewyfFs+ d+kya+ +r++r+t gyWk+tgkd+ v Zosma43g00770.1 17 LAPGFRFHPTDEELVSYYLKRKIGKKAFKV-DAISELDLYKSEPWDLPeKsRIRSRDMEWYFFSPLDRKYANRSRTSRTTGVGYWKTTGKDRGV 109 579***************************.99**************95257788889************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++vg+kktLvf+ g+apkg++t+Wvmheyr+ Zosma43g00770.1 110 CR-GGKTVGMKKTLVFHIGKAPKGTRTNWVMHEYRI 144 *9.9******************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-59 | 11 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.892 | 17 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.7E-28 | 19 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009819 | Biological Process | drought recovery | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 589 aa Download sequence Send to blast |
MAPKDPSPSQ ATAAASLAPG FRFHPTDEEL VSYYLKRKIG KKAFKVDAIS ELDLYKSEPW 60 DLPEKSRIRS RDMEWYFFSP LDRKYANRSR TSRTTGVGYW KTTGKDRGVC RGGKTVGMKK 120 TLVFHIGKAP KGTRTNWVMH EYRIVDEEIS GRTQEAEYVV CRIFQKNGPG PQNGAQYGAL 180 FVEEEWEEEE EVEAEVEKKS GLVLTKEQPC DGSVVNFGDN LFMPQDGLLE HEQNNIPSAD 240 CYDSGQNPHN LFQNNKENIN KMAVNCTDIK SQGNDRKDAV SSTRIGDGLF EFNDDINFAE 300 WMGIDGDADG DASDYLELTD FTNIIDADNS STGHENLPLA SQLEQPGTDE VFNTFGENAS 360 FTEPTHTQLP LTDDNLVFPN EMFGDPMMYF DASSDIPTFE LDGSDPFASD MVDEFMTYFD 420 STEDNQFHFS PEGNKTDAQA SEVPMPTTDI ISDFKNENSS VTPEVSSDKS IINKHLESYL 480 GSIPSPPALA SEYPPNGLKS IKFSPSETHP SSSIRLATGT IRLDWSIHKN SVDHRSSLSY 540 GKNDVFGKSQ GIGGGVLSML ISSDFCVSLL SVLFLGITFK LGLCICKV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-50 | 16 | 167 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-50 | 16 | 167 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-50 | 16 | 167 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-50 | 16 | 167 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swm_B | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swm_C | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swm_D | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swp_A | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swp_B | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swp_C | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
3swp_D | 2e-50 | 16 | 167 | 19 | 169 | NAC domain-containing protein 19 |
4dul_A | 2e-50 | 16 | 167 | 16 | 166 | NAC domain-containing protein 19 |
4dul_B | 2e-50 | 16 | 167 | 16 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00343 | DAP | Transfer from AT3G10500 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9P3V9 | 0.0 | A0A0K9P3V9_ZOSMR; NAC domain protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7107 | 36 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 7e-80 | NAC domain containing protein 53 |
Link Out ? help Back to Top | |
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Phytozome | Zosma43g00770.1 |