PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G141299_P01
Common NameWRKY103, Zm.17359
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 306aa    MW: 33185.5 Da    PI: 4.578
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G141299_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.8e-3089147259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ +tY+ eHnhe
  GRMZM2G141299_P01  89 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSHADPTALLVTYTFEHNHE 147
                        69*************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-3185149IPR003657WRKY domain
SuperFamilySSF1182907.19E-2687149IPR003657WRKY domain
SMARTSM007746.0E-3688148IPR003657WRKY domain
PROSITE profilePS5081132.07689149IPR003657WRKY domain
PfamPF031066.2E-2690147IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MSSAEDGYCS SDSPRAESPD EPQAGADAES PRAGAGLNKR ERDLPASPSS PLPPAKRSRR  60
SVEKRVVSVP LAECGDRPRG ASGEGPPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC  120
PARKQVERSH ADPTALLVTY TFEHNHEAPQ PKTSGGSCCH QQGKPSARPP APKPEPSVVL  180
VQRDELGPEH ELVETEVPEQ EQETEPEEEH EPAEEGVPCL AGPEAAATLT VAPAAEEDES  240
FDFGWFDQYP TWHRSALYAP LLPPEEWERE LQGEDALFAG LGELPECAVV FGRRRELSLA  300
ATAPCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-1864149679Disease resistance protein RRS1
5w3x_D2e-1864149679Disease resistance protein RRS1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G141299
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G141299_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7283110.0KJ728311.1 Zea mays clone pUT6591 WRKY transcription factor (WRKY103) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008675050.10.0probable WRKY transcription factor 65
TrEMBLA0A060D2Q80.0A0A060D2Q8_MAIZE; Putative WRKY transcription factor 69 (Fragment)
TrEMBLA0A3L6FJ170.0A0A3L6FJ17_MAIZE; Putative WRKY transcription factor 65
STRINGGRMZM2G141299_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70883651
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-35WRKY DNA-binding protein 65