PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G094352_P02
Common NamebZIP107, LOC100192658, ZEAMMB73_935043
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 384aa    MW: 42528.5 Da    PI: 9.2736
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G094352_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.3e-1194129338
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                        ++k++rr+++NReAAr+sR+RKka+i +Le+   +L
  GRMZM2G094352_P02  94 RDKVQRRLAQNREAARKSRLRKKAYIRNLETSRVKL 129
                        79***************************9744333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-789135No hitNo description
SMARTSM003380.009192145IPR004827Basic-leucine zipper domain
PfamPF001701.3E-894130IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.82994136IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-696138No hitNo description
PROSITE patternPS00036099114IPR004827Basic-leucine zipper domain
PfamPF141445.1E-29182256IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MGIYERQRHL VPTGVWGEPF RLDADAVAMP LPLAAFPSVT VATPAPLDVV EPEAEEIKLG  60
KRLLQAQQDD VPRMQEAPPS SDSFSHDDDD ARPRDKVQRR LAQNREAARK SRLRKKAYIR  120
NLETSRVKLA QLEQELIMAR RQQHGAYGVG GGVAPPAAPV DPRVAAFELE YAHWVEEQSR  180
QATELRAALQ SHAPDVQLRV LVDAALAHYG ALFQAKARAA RSDAFFVLSG VWRSPAERFF  240
LWIAGFRPSD LLKVLEPQLS PLMDHQASEV RKLQNTARQL EDALSQGMSK LQQTLVDTLM  300
TVDVSPDGAG GGYAGQQMAC AVGKLADLVD FVDKADHLRQ QTLRNMHKIL TPRQAARGLL  360
ALADYGQRLR ALSSLWAARP REPA
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G094352
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G094352_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0386640.0BT038664.1 Zea mays full-length cDNA clone ZM_BFb0304N24 mRNA, complete cds.
GenBankEU9567200.0EU956720.1 Zea mays clone 1571658 transcription factor TGA4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001131340.10.0uncharacterized protein LOC100192658
TrEMBLA0A3L6G9530.0A0A3L6G953_MAIZE; Uncharacterized protein
TrEMBLB4FNH60.0B4FNH6_MAIZE; BZIP transcription factor
STRINGGRMZM2G094352_P020.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-107bZIP family protein
Publications ? help Back to Top
  1. Alexandrov NN, et al.
    Insights into corn genes derived from large-scale cDNA sequencing.
    Plant Mol. Biol., 2009. 69(1-2): p. 179-94
    [PMID:18937034]