PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G091331_P02
Common NameWRKY14, ZEAMMB73_590338, Zm.4272
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 245aa    MW: 25777.6 Da    PI: 11.2364
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G091331_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.41.8e-10226245322
                        -SS-EEEEEEE--TT-SS-E CS
               WRKY   3 DgynWrKYGqKevkgsefpr 22 
                        D+y+WrKYGqK++kgs++pr
  GRMZM2G091331_P02 226 DEYSWRKYGQKPIKGSPYPR 245
                        9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.1E-18180222IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.808.2E-10212245IPR003657WRKY domain
PROSITE profilePS5081112.737219245IPR003657WRKY domain
SuperFamilySSF1182901.44E-7222245IPR003657WRKY domain
PfamPF031062.5E-6226245IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MAVDLMGCYA PRRANDQLAI QEAAAAGLRS LELLVSSLST QAAAPHRAAA HQLQKPPSQP  60
PIGEIADQAV SRFRKVISIL DRTGHARFRR GPVVEAPPPV PPPAVSAPAL PVAHVVAPVG  120
AAQPQSLTLD FTKPNLAVSG GATSVTSTSF FSSVTAGEGS VSKGRSLVSS GKPPLSGHKR  180
KPCAGAHSEA TTNGSRCHCS KRRKNRVKRT IRVPAISAKI ADIPPDEYSW RKYGQKPIKG  240
SPYPR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.42720.0ear| endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G091331
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Regulates rhizobacterium B.cereus AR156-induced systemic resistance (ISR) to P.syringae pv. tomato DC3000, probably by activating the jasmonic acid (JA)- signaling pathway (PubMed:26433201). {ECO:0000250, ECO:0000269|PubMed:26433201}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G091331_P02
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly during leaf senescence (PubMed:11722756). Repressed by rhizobacterium B.cereus AR156 in leaves, and to a lower extent, by P.fluorescens WCS417r (PubMed:26433201). {ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:26433201}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0855610.0BT085561.2 Zea mays full-length cDNA clone ZM_BFc0033I19 mRNA, complete cds.
GenBankBT0864100.0BT086410.2 Zea mays full-length cDNA clone ZM_BFc0163K13 mRNA, complete cds.
GenBankKJ7284150.0KJ728415.1 Zea mays clone pUT6720 WRKY transcription factor (WRKY14) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001344639.11e-175uncharacterized protein LOC100501518
SwissprotQ9SV151e-61WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLK7TNB01e-174K7TNB0_MAIZE; Putative WRKY transcription factor 11
STRINGGRMZM2G091331_P011e-175(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.13e-46WRKY DNA-binding protein 11
Publications ? help Back to Top
  1. Haas BJ, et al.
    Full-length messenger RNA sequences greatly improve genome annotation.
    Genome Biol., 2002. 3(6): p. RESEARCH0029
    [PMID:12093376]
  2. Brand LH,Kirchler T,Hummel S,Chaban C,Wanke D
    DPI-ELISA: a fast and versatile method to specify the binding of plant transcription factors to DNA in vitro.
    Plant Methods, 2010. 6: p. 25
    [PMID:21108821]
  3. Brand LH, et al.
    Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA.
    PLoS ONE, 2013. 8(10): p. e75177
    [PMID:24146751]
  4. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  5. Ali MA,Wieczorek K,Kreil DP,Bohlmann H
    The beet cyst nematode Heterodera schachtii modulates the expression of WRKY transcription factors in syncytia to favour its development in Arabidopsis roots.
    PLoS ONE, 2014. 9(7): p. e102360
    [PMID:25033038]
  6. Jiang CH, et al.
    Transcription factors WRKY70 and WRKY11 served as regulators in rhizobacterium Bacillus cereus AR156-induced systemic resistance to Pseudomonas syringae pv. tomato DC3000 in Arabidopsis.
    J. Exp. Bot., 2016. 67(1): p. 157-74
    [PMID:26433201]
  7. Ali MA, et al.
    Transcription factors WRKY11 and WRKY17 are involved in abiotic stress responses in Arabidopsis.
    J. Plant Physiol., 2018. 226: p. 12-21
    [PMID:29689430]