PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G073258_P01
Common NameEREB59, LOC103626924, LOC103652853, ZEAMMB73_753105
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 290aa    MW: 30602.1 Da    PI: 6.3984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G073258_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.6e-17119168355
                AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+++ +g
  GRMZM2G073258_P01 119 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAALAARG 168
                        57******.**********32..2.24***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.6E-30118182IPR001471AP2/ERF domain
PROSITE profilePS5103221.72118176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-28119177IPR001471AP2/ERF domain
CDDcd000183.98E-13119153No hitNo description
PfamPF008472.1E-12119168IPR001471AP2/ERF domain
PRINTSPR003672.2E-8119130IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-21119178IPR016177DNA-binding domain
PRINTSPR003672.2E-8142158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MEQGDPTPAA SACNCDPAAA PPAWIPLHDH DDTLLQQLDA ILLGMDDDDV ATADDRCCSG  60
WLSSSPSPSP SSSSEATTTA SPPPSTREQH RRHAAKDAAA NAALAGGGDE KRALTTAAFI  120
GVRKRPWGKF AAEIRDSTRK GARVWLGTFD TPEAAALAYD QAALAARGAA AVLNFPVERV  180
VESLGALALA GAGSPVLALK RRHSKRTRRR KLSAVATTDG DGKDTMKQPR QCSGLPVAVP  240
SYTTVAAVPP QQQHATARGQ SHTRYGVVEL EDLGTDYLDE LLRVSSELEY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-231191781574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G073258
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G073258_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276830.0KJ727683.1 Zea mays clone pUT5611 AP2-EREBP transcription factor (EREB59) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008678055.10.0ethylene-responsive transcription factor ERF094
TrEMBLK7UQ600.0K7UQ60_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G073258_P010.0(Zea mays)
STRINGGRMZM5G837876_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1732823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.17e-17ethylene-responsive element binding factor 15