PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G069525_P01
Common NameLOC100217256
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 312aa    MW: 33135.2 Da    PI: 8.8973
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G069525_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.73.6e-301972255
            G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                       pr+rW+ +LH++Fv+a+++LGG++kAtPk il++m+  gLt++hvkSHLQ+YR 
  GRMZM2G069525_P01 19 PRMRWSADLHRSFVQAIDSLGGQHKATPKLILQFMGARGLTISHVKSHLQMYRA 72
                       9****************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.5651575IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-271573IPR009057Homeodomain-like
SuperFamilySSF466894.48E-141672IPR009057Homeodomain-like
TIGRFAMsTIGR015574.9E-231972IPR006447Myb domain, plants
PfamPF002491.0E-72071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MGSGRNGAVV RRYVRSKEPR MRWSADLHRS FVQAIDSLGG QHKATPKLIL QFMGARGLTI  60
SHVKSHLQMY RAASLGAERG GGTPAQLLQR RYSCSGDERG GPKEEFLCCP PPPPLKRARM  120
GYESMQGSHG VSDARTTAGG GGLYCIDDYM QAMAVGWRIK EEGLIRWQRR DAAAATPSNL  180
QAMGCLVQES GPFKQVRRPE AHRLGSALKQ QDGDDSSKED GNDGRPQSSN AATKEDEASE  240
QCSLSLSLGN LDAKCGRGMA AAASSRSGES SCILTASPAR RSSSDCSGHS GCFVVGPGGV  300
VSLELSLSIC GS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A6e-172073356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-172073356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-172073356Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-172073356Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.967500.0meristem| pollen| sheath| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G069525
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G069525_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0382180.0BT038218.1 Zea mays full-length cDNA clone ZM_BFb0217P21 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001137083.10.0uncharacterized protein LOC100217256
TrEMBLB4FM800.0B4FM80_MAIZE; Putative Myb family transcription factor
TrEMBLK4JRV70.0K4JRV7_MAIZE; G2-like transcription factor (Fragment)
STRINGGRMZM2G069525_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29663583
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.12e-27G2-like family protein