PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC187157.4_FGP001
Common NameZEAMMB73_137348
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 291aa    MW: 29778.4 Da    PI: 7.6803
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC187157.4_FGP001genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-1796144355
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++aa+++ +g
  AC187157.4_FGP001  96 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDAAALSVKG 144
                        9****998.**********843...6**********************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-1294144IPR001471AP2/ERF domain
PROSITE profilePS5103222.5595152IPR001471AP2/ERF domain
SMARTSM003804.2E-3295158IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2095152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.1E-3095152IPR001471AP2/ERF domain
PRINTSPR003674.1E-996107IPR001471AP2/ERF domain
CDDcd000184.44E-1896152No hitNo description
PRINTSPR003674.1E-9118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MARAALLSAA ASLLPPLLRA GARDGSPPAR CRIVVYMAMS EPSSDTSCTS SCSSGPSTST  60
SPRAAPSAAA AAASGGGKKR PRSDDGGSSS SSAPAYRGVR MRAWGKWVSE IREPRKKSRI  120
WLGTFPCPEM AARAHDAAAL SVKGARAVLN FPGLARHLPR PASLAPRDVQ AAAARAALMH  180
HSSAGCCCCG GGGGGGSTAT ATSSSSSSSA AADVGGCGQR RDGAAAHDEP EPERQPLEVA  240
AELVFDELAP LWVEDVVELG PSADHPWPWT PCDGLDIAAG FHPLPLLWDD Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-15961521572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC187157.4_FG001
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC187157.4_FGP001
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9768271e-125EU976827.1 Zea mays clone 991178 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001357939.11e-180ethylene-responsive transcription factor TINY
TrEMBLA0A1D6FGH11e-178A0A1D6FGH1_MAIZE; Putative AP2/EREBP transcription factor superfamily protein
STRINGAC187157.4_FGP0010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.12e-39ERF family protein