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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_015903123.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
|
| Family |
GRAS |
| Protein Properties |
Length: 526aa MW: 57582.5 Da PI: 5.8716 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_015903123.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 328.2 | 1.6e-100 | 130 | 518 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn.............sseela 79
lv+lL+++Aea+ +++ la+ +L rl+el+sp++ ++m+Rlaayft AL+ l +++ ++ + ++ ++ +++++a
XP_015903123.1 130 LVHLLMAAAEALIGANKSrdLARVILVRLKELVSPTDgTNMERLAAYFTDALQGLLEGTGGAHGNSNNNKHFITNGphhhhhhhrdehhQTDVIA 224
689********9765555459***********9987769*****************997666655555555443334445567778888999999 PP
GRAS 80 alklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAe 170
a++l++++sP++kf+++taNqaIleav +++r+Hi+D+di++G+QW++L+qaL sR++gpp +lRiT++++ sg s + +etg+rL fA+
XP_015903123.1 225 AFQLLQDMSPYVKFGQFTANQAILEAVIQDRRIHIVDYDIMEGIQWASLMQALVSRKDGPPtpHLRITALSRGGSGrrSIGTCQETGRRLVAFAA 319
99*******************************************************776556*********888898999************** PP
GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyy 264
++g pf+f+ ++ e++++++L++ +gEal+Vn++l+l ++ + ++ ++L+ k+l+P+++++ve+e+ +++ F++rf+++l++y
XP_015903123.1 320 SIGQPFSFHQCRLDSDESFRPSALKLVKGEALIVNCMLNLPHFSYRAPDSVA---SFLSGSKTLNPRLITLVEEEVAPtGDGGFVARFMDSLYHY 411
**********9999*****************************855555555...9*******************8877**************** PP
GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgsl 358
sa++dslea++p ++++r+ vEr++lg++i +a ++ e+ + W e+l+ GF++vp+s+ ++ qaklll ++ dgyrvee ++ l
XP_015903123.1 412 SAVYDSLEAGFPMQNRARALVERVFLGPRIAGSLARIYRA---HGEEGSPWGEWLSGLGFRAVPISYANQVQAKLLLGIFN-DGYRVEELaNNRL 502
**************************************99...677889********************************.******9758899 PP
GRAS 359 vlgWkdrpLvsvSaWr 374
vlgWk+r+L+s+S+W+
XP_015903123.1 503 VLGWKSRRLLSASVWT 518
9**************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MNLVTSATAM AMAIDDALEL DLSSYSTTTT TTTTTTTTGG AITTTTSSPE YDHGCNWNDW 60
SPVVDWDALS GAHDDFRDLI ESMMDEDGEL NSARGVQEAC ISNSTSSSTT DTIRTVDDES 120
NGQDSKGLRL VHLLMAAAEA LIGANKSRDL ARVILVRLKE LVSPTDGTNM ERLAAYFTDA 180
LQGLLEGTGG AHGNSNNNKH FITNGPHHHH HHHRDEHHQT DVIAAFQLLQ DMSPYVKFGQ 240
FTANQAILEA VIQDRRIHIV DYDIMEGIQW ASLMQALVSR KDGPPTPHLR ITALSRGGSG 300
RRSIGTCQET GRRLVAFAAS IGQPFSFHQC RLDSDESFRP SALKLVKGEA LIVNCMLNLP 360
HFSYRAPDSV ASFLSGSKTL NPRLITLVEE EVAPTGDGGF VARFMDSLYH YSAVYDSLEA 420
GFPMQNRARA LVERVFLGPR IAGSLARIYR AHGEEGSPWG EWLSGLGFRA VPISYANQVQ 480
AKLLLGIFND GYRVEELANN RLVLGWKSRR LLSASVWTSS SLDSDL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
