PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015901967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 518aa MW: 57828.8 Da PI: 9.0533 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.2 | 4.1e-09 | 168 | 230 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a +eeL++k++ L++eN+ Lk e e+ ke+++l++ + XP_015901967.1 168 EKEERRIRRVLANRESARQTIRRRQALCEELTRKAADLSQENEYLKRERESTLKEYQSLQTTN 230 78999*****************************************************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 2.6E-8 | 168 | 230 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 2.3E-10 | 168 | 232 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.254 | 170 | 233 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.1E-6 | 172 | 236 | No hit | No description |
SuperFamily | SSF57959 | 5.51E-6 | 172 | 227 | No hit | No description |
CDD | cd14702 | 2.72E-14 | 173 | 224 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence Send to blast |
MLSERCSVSS SSGSSSTSAS AGGMFYEGAD RMVERELEAA ETLADLAHFA MRECSGAESA 60 GNWGHKGKRA GKRVKSKSPP TELGLNPGHP VTRSLDLAEQ DKAVVNHQKL GKLCSDALKE 120 PVKAEQNPSN KKLKVERDAV LPKPSPICST SYPAYGCGKS RRNLSEAEKE ERRIRRVLAN 180 RESARQTIRR RQALCEELTR KAADLSQENE YLKRERESTL KEYQSLQTTN KHLKDQISKI 240 KAEVEETPIS HKPGSVQISP SPPTSCSLFF YNHPSFTPLF WPSISQSPNS VQPQHIQQNP 300 IIMPSDIPLP ANGRHDSYHE QENLININGA RTPFYIFPCP WLFPRPDHKN AFQPQVPYFP 360 KKEEEETSVN NQYSTTSSSR TVPHLDSHHS FLPLKVKTEA SASMEAGPAN DFHEISAGFS 420 QDGVDQHIGS QPRDREWSFI HVPNVKQENG LQLDSTTHIE TSSKAFHTSG AFPEKSGERT 480 ILPTKKVADA VAAAEARKRR KELTKLKNLH GRQCRMHC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 496 | 501 | RKRRKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015901967.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015901967.1 | 0.0 | uncharacterized protein LOC107434956 isoform X1 | ||||
TrEMBL | A0A2N9IE48 | 1e-161 | A0A2N9IE48_FAGSY; Uncharacterized protein | ||||
STRING | XP_009374746.1 | 1e-160 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6400 | 28 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 2e-70 | bZIP family protein |