PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015900923.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 356aa    MW: 41081.1 Da    PI: 8.7442
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015900923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.31.1e-51111381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deel+v+yL++k+ +++l++ ++i+e+d+yk++Pw+Lp k++ +e+ew+fFs+rd+ky++g+r+nra+ sgyWkatg+dk++l++
  XP_015900923.1  11 LPPGFRFHPSDEELIVHYLRNKIISSPLPA-NIITEIDLYKYDPWQLPGKASFGEDEWFFFSPRDRKYPNGTRPNRAAGSGYWKATGTDKHILTS 104
                     79****************************.89***************8888999**************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ +g+kk Lvfykgr pkg ktdW+m+eyrl
  XP_015900923.1 105 cGTKSIGVKKALVFYKGRPPKGIKTDWIMNEYRL 138
                     78889***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-639165IPR003441NAC domain
PROSITE profilePS5100560.12511165IPR003441NAC domain
PfamPF023656.5E-2612138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MERDQNADIL LPPGFRFHPS DEELIVHYLR NKIISSPLPA NIITEIDLYK YDPWQLPGKA  60
SFGEDEWFFF SPRDRKYPNG TRPNRAAGSG YWKATGTDKH ILTSCGTKSI GVKKALVFYK  120
GRPPKGIKTD WIMNEYRLLD TMFWTSKKKG SMRLDDWVLC RIRHKSNNPR STWKDLNSAG  180
TYEPAGYFQR VDKPCSKSSM NPNLEMARDY FYKDCPMLPY IFASQELPCM ETTSSISFQS  240
SDNTQSSTSN KKNEQAHFSV SASDYLFNPL KRKPAYREND YESNNVSVGN KRIISNSRQE  300
KTKEPNVSVV NYNTSAMNCW DVEQSQSDAF NTINHNWTSN NFPYQELSHL VYAICD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-67216811171NAC domain-containing protein 19
3swm_B1e-67216811171NAC domain-containing protein 19
3swm_C1e-67216811171NAC domain-containing protein 19
3swm_D1e-67216811171NAC domain-containing protein 19
3swp_A1e-67216811171NAC domain-containing protein 19
3swp_B1e-67216811171NAC domain-containing protein 19
3swp_C1e-67216811171NAC domain-containing protein 19
3swp_D1e-67216811171NAC domain-containing protein 19
3ulx_A1e-6721686171Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015900923.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015900923.10.0NAC domain-containing protein 2-like
TrEMBLA0A498K1W01e-148A0A498K1W0_MALDO; Uncharacterized protein
STRINGXP_008243919.11e-149(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-82NAC-like, activated by AP3/PI