PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015899836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | NAC | ||||||||
Protein Properties | Length: 356aa MW: 41094.1 Da PI: 8.5891 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.3 | 1.1e-51 | 11 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+v+yL++k+ +++l++ ++i+e+d+yk++Pw+Lp k++ +e+ew+fFs+rd+ky++g+r+nra+ sgyWkatg+dk++l++ XP_015899836.1 11 LPPGFRFHPSDEELIVHYLRNKIISSPLPA-NIITEIDLYKYDPWQLPGKASFGEDEWFFFSPRDRKYPNGTRPNRAAGSGYWKATGTDKHILTS 104 79****************************.89***************8888999**************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+kk Lvfykgr pkg ktdW+m+eyrl XP_015899836.1 105 cGTKSIGVKKALVFYKGRPPKGIKTDWIMNEYRL 138 78889***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-63 | 9 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.125 | 11 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.5E-26 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence Send to blast |
MERDQNADIL LPPGFRFHPS DEELIVHYLR NKIISSPLPA NIITEIDLYK YDPWQLPGKA 60 SFGEDEWFFF SPRDRKYPNG TRPNRAAGSG YWKATGTDKH ILTSCGTKSI GVKKALVFYK 120 GRPPKGIKTD WIMNEYRLLD TMFWTSKKKG SMRLDDWVLC RIRHKSNNPR STWKDLNSAG 180 TYEPAGYFQR VDKPCSKSSM NPNLEMARDY FYKDCPMLPY IFASQELPCM ETTSSISFQS 240 SDNTQSSTSN KKNEQAHFSV SASDYLFNPL KRKPAYREND YESNNVSVGN KRIISNSRQE 300 KTKEPNVSVV DYNISAMNCW DVEQSQSDAF NTINHNWTSN NFPYQELSHL VYAICD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-67 | 2 | 168 | 8 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-67 | 2 | 168 | 8 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-67 | 2 | 168 | 8 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-67 | 2 | 168 | 8 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swm_B | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swm_C | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swm_D | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swp_A | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swp_B | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swp_C | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3swp_D | 2e-67 | 2 | 168 | 11 | 171 | NAC domain-containing protein 19 |
3ulx_A | 2e-67 | 2 | 168 | 6 | 171 | Stress-induced transcription factor NAC1 |
4dul_A | 2e-67 | 2 | 168 | 8 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-67 | 2 | 168 | 8 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015899836.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015899836.1 | 0.0 | NAC domain-containing protein 2-like | ||||
TrEMBL | A0A498K1W0 | 1e-148 | A0A498K1W0_MALDO; Uncharacterized protein | ||||
STRING | XP_008243919.1 | 1e-149 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2416 | 29 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 7e-82 | NAC-like, activated by AP3/PI |