PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015895683.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 468aa    MW: 51929.3 Da    PI: 6.5104
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015895683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.2e-10183221543
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                     k  rr+++NReAAr+sR+RKka++++Le+    L++  +
  XP_015895683.1 183 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQ 221
                     788*************************97666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-8179256IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415181225IPR004827Basic-leucine zipper domain
PfamPF077169.9E-7181225IPR004827Basic-leucine zipper domain
CDDcd147088.81E-23183234No hitNo description
SuperFamilySSF579591.13E-6183226No hitNo description
Gene3DG3DSA:1.20.5.1702.9E-7184227No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141442.8E-30267340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MQSFKQTPSS NPVLYSHSFI YFRGEENTRN QTRFSDLGEL EQSAAAFPHD DAVVLSPNVG  60
SIFSLKSNSV AVVPNNLQYG TLNTNTGCLD IVASTAGTGS GCVDTGQQFM YQQKGTTTVS  120
ASSLGNGHFE NWGESAIADT SQQTDTSTDV DTDDKNQFHG VGHDVHLAVD SMEQAKSKTG  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLRLTQLE QELQRARQQG IFIANGFSGD  240
HNLMAGNGAL AFDLDYARWL DEHQRLINDL RSAINSHMCD NELRILVEGV MVHYDEIFRL  300
KSIGAKADVF HMLSGMWKTP AERCFMWLGG FRSSEVLKIL GNHLEPLTEQ QLMGICNLQQ  360
SSQQAEDALS QGMEALQQSL VETLSSTTLG PAGCGNVADY MGQMAIAMGK LATLENFLHQ  420
ADLLRQQTLQ QMHRILTTRQ AARALLVISD YFSRLRALSS LWLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015895683.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015895683.10.0transcription factor TGA2.3 isoform X2
SwissprotQ415581e-180HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A061ECH80.0A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1
STRINGEOY021120.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-152bZIP family protein