PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015895682.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 469aa    MW: 52057.4 Da    PI: 6.5104
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015895682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.73e-09185222643
                     HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                       rr+++NReAAr+sR+RKka++++Le+    L++  +
  XP_015895682.1 185 TLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQ 222
                     569************************97666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-6179257IPR004827Basic-leucine zipper domain
PfamPF077162.3E-6181226IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.933182226IPR004827Basic-leucine zipper domain
CDDcd147084.58E-22184235No hitNo description
SuperFamilySSF579592.09E-6186227No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-7187228No hitNo description
PfamPF141442.8E-30268341IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MQSFKQTPSS NPVLYSHSFI YFRGEENTRN QTRFSDLGEL EQSAAAFPHD DAVVLSPNVG  60
SIFSLKSNSV AVVPNNLQYG TLNTNTGCLD IVASTAGTGS GCVDTGQQFM YQQKGTTTVS  120
ASSLGNGHFE NWGESAIADT SQQTDTSTDV DTDDKNQFHG VGHDVHLAVD SMEQAKSKTG  180
DQKQTLRRLA QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQRARQQ GIFIANGFSG  240
DHNLMAGNGA LAFDLDYARW LDEHQRLIND LRSAINSHMC DNELRILVEG VMVHYDEIFR  300
LKSIGAKADV FHMLSGMWKT PAERCFMWLG GFRSSEVLKI LGNHLEPLTE QQLMGICNLQ  360
QSSQQAEDAL SQGMEALQQS LVETLSSTTL GPAGCGNVAD YMGQMAIAMG KLATLENFLH  420
QADLLRQQTL QQMHRILTTR QAARALLVIS DYFSRLRALS SLWLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015895682.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015895682.10.0transcription factor TGA2.3 isoform X1
SwissprotQ415581e-178HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A061ECH80.0A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1
STRINGEOY021120.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-150bZIP family protein