PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015893470.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 335aa    MW: 38431.2 Da    PI: 5.3922
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015893470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.91.3e-25141543128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiy.kvePwdLpk........kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                     +G rF+Ptdeelv +yL +k++g++ l+  ++++++d++ k ePw++ +         ++++ +++yfF+k +k++++gkr nr++ sg+Wk + 
  XP_015893470.1  14 KGWRFRPTDEELVGYYLLNKITGSTpLPNPSIVHDFDVFgKQEPWEIWNmfrphddhDHDTDPDDLYFFTKPKKTTPKGKRFNRKVGSGTWKGQN 108
                     79********************99977777789***987367*****6435666544333344488****************************9 PP

             NAM  88 kdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +e+++       ++ ++glkk + +  +++ k +  +W+m ey l
  XP_015893470.1 109 SGTEIYAYsesgeaNNVVMGLKKRFHYE-NQQLKDQDGSWIMFEYCL 154
                     9999999777776666669*****9986.7777889*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.94E-329177IPR003441NAC domain
PROSITE profilePS5100530.56112177IPR003441NAC domain
PfamPF023652.6E-1814154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MEFPAKVRVP QRLKGWRFRP TDEELVGYYL LNKITGSTPL PNPSIVHDFD VFGKQEPWEI  60
WNMFRPHDDH DHDTDPDDLY FFTKPKKTTP KGKRFNRKVG SGTWKGQNSG TEIYAYSESG  120
EANNVVMGLK KRFHYENQQL KDQDGSWIMF EYCLAGSLEH CITGPDNDFV LCQIRKKSSS  180
ENDNKKNKNK RKNVIMSLND DNYVLPPLKN QKTNHGGNHD SGMFAVPSSQ ALPICQREPP  240
FQKLPQDLPL AVEGDHGHNT DVQVYPLPLL LTCPQLQQQQ QQQQQQPPLP QSSLPLPELG  300
DEFVMLLPQQ PLPLPQDDDF DDFILDFGVL DDFNL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015893470.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015893470.10.0NAC domain-containing protein 83-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-14NAC domain containing protein 83