PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015892157.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 236aa    MW: 26828.3 Da    PI: 10.3516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015892157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.84.1e-11112153351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  XP_015892157.1 112 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 153
                     79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.5E-4111168IPR001471AP2/ERF domain
PfamPF008472.0E-5111154IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-7112156IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.5E-6114158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MVSLRRRKLL GLCSGRSSFL DPLPRFSSNG IAPANSQYTR PVSVHPMPSD DADHLELQKM  60
SAKVGPGSSN VSGSSFSSIS KDQHNQPVAG PPIKRRKRHR RKHFQNQEPC LMRGVYFKNM  120
KWQAAIKVDK KQIHLGTVGS QEEAAHLYDR AAFMCGREPN FELSEEEKQE LRKFKWEEFL  180
AMTRHAITNK KHRRRLGAES QKRSEPSRLQ NGDWEGKNEV NDLSASEDME PDTSAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015892157.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015892157.11e-177ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_024933624.11e-177ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A2P5AHQ21e-116A0A2P5AHQ2_PARAD; AP2/ERF transcription factor
STRINGEOX938571e-112(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-48ERF family protein