PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015891498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 442aa MW: 47585.8 Da PI: 6.7476 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.7 | 1.7e-15 | 214 | 269 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L e ++L k l ++ ++++ XP_015891498.1 214 DAKRARRMLSNRESARRSRRRKQAQMGELETQVNQLRVEHSTLLKDLTDMNSKYDN 269 68******************************************888777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.9E-11 | 211 | 266 | No hit | No description |
SMART | SM00338 | 4.1E-18 | 212 | 276 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.967 | 214 | 268 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-13 | 215 | 268 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.33E-11 | 216 | 266 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 219 | 234 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 2.2E-26 | 283 | 409 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002240 | Biological Process | response to molecule of oomycetes origin | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence Send to blast |
MHSVFSVDDI SDTFWASNPA MNRSASEWAF ERFLEEFSSP AATPRTPLPD SLPASSVASS 60 SVASESSTSK RQDRGDEVVE IKKHDHLSPP LNPSSTALTD SDQYRAFLKN RLDLACAAVA 120 LTRESACVKP GDSANVAQSQ LQAPKASQVG SGAHDKVVES EADGGPLGIP ALPSIQKKIG 180 GQSKQTTSGS SREESDDDDL EGDLEITDNM DPADAKRARR MLSNRESARR SRRRKQAQMG 240 ELETQVNQLR VEHSTLLKDL TDMNSKYDNA AVDNRILKAD IETLRAKVKM AEETVKRVTG 300 INPLLLAMSN VAGTGMPSVN SAINGSTNAA VPMQQNRNQL FHQAVPSIPT ATPHHQRLDS 360 SFPGNTPVPL VGNHPQIEVN RQSDVGGGKM VDISSIQQHT GRVANLQKQN GPGINPCGSL 420 PGPGWERESS QAVAKNNKHN QI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 228 | 235 | RRSRRRKQ |
2 | 230 | 235 | SRRRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015891498.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015891498.1 | 0.0 | light-inducible protein CPRF2 isoform X2 | ||||
TrEMBL | W9QCP7 | 0.0 | W9QCP7_9ROSA; Light-inducible protein CPRF2 | ||||
STRING | XP_010087124.1 | 0.0 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54620.1 | 5e-57 | basic leucine zipper 25 |