PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015890018.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 157aa    MW: 17902.1 Da    PI: 6.521
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015890018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.52.1e-113272545
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                    ++ +r+ +NRe+ArrsR RK+++++ L  +v +L + N + 
  XP_015890018.1 32 RKRKRMLSNRESARRSRMRKQKQLDDLSAEVGQLRKDNNQI 72
                    67899********************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-92372No hitNo description
SMARTSM003385.8E-132892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1173093IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.1E-113286No hitNo description
PfamPF001701.4E-83277IPR004827Basic-leucine zipper domain
CDDcd147021.07E-163383No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MASPSRASSG SSSALQTSSG SEEDLHQLMD QRKRKRMLSN RESARRSRMR KQKQLDDLSA  60
EVGQLRKDNN QILMSMNITT QLYINLEAEN SVLKAQMAEL NNRLQSLNDI IDYINSSNWL  120
VETDHQDMIV SDGFVNPWNS IHVNQPIMAA ADHTFMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13152RKRKRMLSNRESARRSRMRKQK
24451RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015890018.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015889898.11e-112bZIP transcription factor 11-like
RefseqXP_015890018.11e-112bZIP transcription factor 11-like
SwissprotC0Z2L52e-47BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A251NCA96e-65A0A251NCA9_PRUPE; Uncharacterized protein
TrEMBLM5VSC45e-65M5VSC4_PRUPE; Uncharacterized protein
STRINGEMJ039318e-66(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-46basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]