PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015887668.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 361aa    MW: 40483.5 Da    PI: 6.6855
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015887668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-1174114242
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                     +++k++rr+++NReAAr+sR+RKka++++Le+   +L +  
  XP_015887668.1  74 SSDKAQRRLAQNREAARKSRLRKKAYVQQLETSRLKLAQLE 114
                     589****************************8544443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-870122No hitNo description
SMARTSM003387.4E-773133IPR004827Basic-leucine zipper domain
PfamPF001708.7E-875115IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.23275119IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.71E-777117No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141446.8E-30165237IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MSSSSTQFAT SRQMGIYEPF RQVSMWKDTF GGDNLSYTGA STIGEVDAKL ENKFELVSHE  60
SVQPSGNDEE GNKSSDKAQR RLAQNREAAR KSRLRKKAYV QQLETSRLKL AQLEQELERS  120
RKQGLYVGSP LGTSHVGFSG TVNSGIMAFE MEYGHWVEEQ HKQNCELRNA LQAHAADIQL  180
RMLVESALNH YYSLFRMKAD AAKADVFYLV SGIWRTSAER FFLWIGGFRP SELLTVLLPQ  240
IEPLTDQQVL DVGNLQHSSQ QAEDALSQGI DKLQQSLAHT MAADPMSGDT YGSQMAAAVE  300
KLDELESFVS QADHLREQTL RRMSSILTTH QAARGLLALG EYFRRLRALS SLWAARPCEP  360
V
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015887668.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015887663.10.0transcription factor TGA7 isoform X1
RefseqXP_015887666.10.0transcription factor TGA3 isoform X5
RefseqXP_015887668.10.0transcription factor TGA3 isoform X5
RefseqXP_015887669.10.0transcription factor TGA3 isoform X5
RefseqXP_015887672.10.0transcription factor TGA3 isoform X4
RefseqXP_024931824.10.0transcription factor TGA3 isoform X5
SwissprotQ93ZE21e-157TGA7_ARATH; Transcription factor TGA7
TrEMBLF6H0P00.0F6H0P0_VITVI; Uncharacterized protein
STRINGVIT_18s0001g04470.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-159bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]