PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015887665.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 397aa    MW: 44697.9 Da    PI: 7.64
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015887665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-11110150242
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                     +++k++rr+++NReAAr+sR+RKka++++Le+   +L +  
  XP_015887665.1 110 SSDKAQRRLAQNREAARKSRLRKKAYVQQLETSRLKLAQLE 150
                     589****************************8544443333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-8106158No hitNo description
SMARTSM003387.4E-7109169IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.232111155IPR004827Basic-leucine zipper domain
PfamPF001701.0E-7111151IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.51E-7113153No hitNo description
PROSITE patternPS000360116131IPR004827Basic-leucine zipper domain
PfamPF141448.0E-30201273IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MIVKLAILLA VSSGNRSTKA CCERVVHFLA SLCFWILKIF NFEKNKKMEM GIYEPFRQVS  60
MWKDTFGGDN LSYTGASTIG EVDAKLENKF ELVSHESVQP SGNDEEGNKS SDKAQRRLAQ  120
NREAARKSRL RKKAYVQQLE TSRLKLAQLE QELERSRKQG LYVGSPLGTS HVGFSGTVNS  180
GIMAFEMEYG HWVEEQHKQN CELRNALQAH AADIQLRMLV ESALNHYYSL FRMKADAAKA  240
DVFYLVSGIW RTSAERFFLW IGGFRPSELL TVLLPQIEPL TDQQVLDVGN LQHSSQQAED  300
ALSQGIDKLQ QSLAHTMAAD PMSGDTYGSQ MAAAVEKLDE LESFVSQADH LREQTLRRMS  360
SILTTHQAAR GLLALGEYFR RLRALSSLWA ARPCEPV
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015887665.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015887665.10.0transcription factor TGA7 isoform X3
SwissprotQ93ZE21e-152TGA7_ARATH; Transcription factor TGA7
TrEMBLF6H0P00.0F6H0P0_VITVI; Uncharacterized protein
STRINGVIT_18s0001g04470.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-155bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]