PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015884344.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 439aa    MW: 47381.3 Da    PI: 10.2257
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015884344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.7e-15361411555
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                     +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++Lkk+  e+ ++
  XP_015884344.1 361 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELKKKQAEMLEM 411
                     79***************************************9876555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-14357422IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.392359408IPR004827Basic-leucine zipper domain
PfamPF001709.2E-13361412IPR004827Basic-leucine zipper domain
CDDcd147072.18E-28361415No hitNo description
SuperFamilySSF579596.88E-11361410No hitNo description
Gene3DG3DSA:1.20.5.1709.8E-15361410No hitNo description
PROSITE patternPS000360364379IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MGTNNINFKS FVNDPPTDGG GAGRPPGNDQ LMRQPSIYSL TFDELQNTMG GLGKDFGSMN  60
MDELLKNIWS AEETQTMVSA AATTGGQDRG IGGTQPLQRQ GSLTLPRTLS QKTVDEVWKD  120
IFKDGSGAAG ANMPQRQHTL GEMTLEEFLV RAGVVREDAQ LAGKPPTDEG SIFFGDLPRV  180
NNNTTGLGIN FQQTGRPGAG LMNNRISENN NNNNNQIAVQ ATNLPLNVNG VRSNQQQNQQ  240
KHHQQQIFPK QPTAAYPSQM PMANSAQLGS PAMRNGIMGI SDQGLNTGLV QGSALPGGGI  300
GVVGLGAGPV SMAAVSPANQ LSSDGVKSNG DTSSVSPVPY VFNGGLRGRK CSGAVEKVVE  360
RRQRRMIKNR ESAARSRARK QAYTMELEAE VAKLKEENQE LKKKQAEMLE MQKNQAMEMM  420
NVQRGVKKRC LRRTQTGPW
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015884344.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015884344.10.0bZIP transcription factor TRAB1 isoform X1
RefseqXP_015884345.10.0bZIP transcription factor TRAB1 isoform X1
SwissprotQ9M7Q41e-130AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A061FIW70.0A0A061FIW7_THECC; Abscisic acid responsive elements-binding factor 2 isoform 1
STRINGEOY144380.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-112abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]