PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015881716.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 291aa    MW: 32434.8 Da    PI: 8.924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015881716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.65.4e-1297149356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfsl...gkfgtaeeAakaaiaarkklege 56 
                     y+GVr +  + +Wv+eIr+p     r   r++l   g++  +e+Aa+a++aa  + +ge
  XP_015881716.1  97 YRGVRMRA-WSKWVSEIRVP-----RsvDRIWLgplGSYNDPEKAAQAYDAAQYCVHGE 149
                     9****998.**********9.....447889862226888999***********99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.27896156IPR001471AP2/ERF domain
SMARTSM003801.1E-2096162IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-1597157IPR016177DNA-binding domain
CDDcd000186.84E-1297158No hitNo description
PfamPF008478.9E-597149IPR001471AP2/ERF domain
PRINTSPR003674.6E-797108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2197157IPR001471AP2/ERF domain
PRINTSPR003674.6E-7138158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MGIMGKFLSC HMQLVISPAT ILSVLHAFLR DKLHFISCSL IFYCHKWHFT FSFFTSYLSN  60
LSKVFLVNPS FPPYTHMNLV TTSSSKKIHX EGTPGPYRGV RMRAWSKWVS EIRVPRSVDR  120
IWLGPLGSYN DPEKAAQAYD AAQYCVHGEG GRFNFPADRR PELPVGXMLS LTKKGMQTIA  180
TSFASSDVSV SSXVSSIMTT QMPSDKPAPP NLLVSRDVDS ANEAVDDSFA PNSVFKAVGA  240
AASPDSLQLG DFIMPDTEWM TSFRLLVLVI CSRQMQSHYV LLYMVMVGLR L
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015881716.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224610.18e-64PREDICTED: ethylene-responsive transcription factor ERF015
RefseqXP_021804224.18e-64ethylene-responsive transcription factor ERF015-like
RefseqXP_021816964.18e-64ethylene-responsive transcription factor ERF015
TrEMBLM5XQ745e-62M5XQ74_PRUPE; Uncharacterized protein
STRINGXP_008224610.13e-63(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF154791011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.15e-42ERF family protein