PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015880480.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 196aa    MW: 22785.3 Da    PI: 6.5999
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015880480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.21.2e-1582131554
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++
  XP_015880480.1  82 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSE 131
                     689******************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-1478142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.35880143IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-1382131No hitNo description
PfamPF001702.3E-1382139IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-1382155No hitNo description
CDDcd147026.87E-2083134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MQPNEVTGLH FLVPSNPSPY PSHFSINQNN TPTFQVNRFT SPLYNFQIPS QVQEINPQSS  60
CFSNNSTSDE ADDHHHSLIN ERKQRRMISN RESARRSRMR KQKHLDELWS QVVWLRNENH  120
QLIDKLNHVS ECHDRVLQEN AQLKEEASEL RQMLTDMQLN SPYPTLRELE DLPCNTAYLR  180
AESSNQSITT SMGLLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194101RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015880480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015880480.11e-144basic leucine zipper 43
SwissprotQ9FMC24e-45BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2P5BGE31e-112A0A2P5BGE3_TREOI; Basic-leucine zipper transcription factor
STRINGVIT_14s0083g00700.t011e-103(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.14e-58basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]