PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015880381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | NAC | ||||||||
Protein Properties | Length: 216aa MW: 24665.6 Da PI: 8.3528 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.7 | 9.6e-23 | 13 | 149 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk..kvka.eek....ewyfFskrdkkyatgkrknratksgyWkatgkd 89 +G rF+Ptd++lv +yL ++v+g +++ + +++d++ k ePw++ + + ++ +++ ++yf++k +k++++gkr nr++ sg+Wk + ++ XP_015880381.1 13 KGWRFRPTDDDLVGYYLLREVTGCPFSRVGIAHDFDVFgKKEPWEIWStfRSENdHDNpdpdDLYFYTKPKKNTPKGKRFNRKVGSGTWKGQDSS 107 79***********************9998999999987367*****742322222222445588******************************* PP NAM 90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e++++ ++ ++g +k + + ++++k + + +m ey l XP_015880381.1 108 TEIYASsaddNDIVIGFRKRFHYE-NKQSKEHDGSRIMFEYCL 149 ****9877766667*******987.66667789999****987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.582 | 11 | 172 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.66E-27 | 12 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.6E-14 | 13 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MELPAPVPVP SLKGWRFRPT DDDLVGYYLL REVTGCPFSR VGIAHDFDVF GKKEPWEIWS 60 TFRSENDHDN PDPDDLYFYT KPKKNTPKGK RFNRKVGSGT WKGQDSSTEI YASSADDNDI 120 VIGFRKRFHY ENKQSKEHDG SRIMFEYCLA GSLSHCITGP DNDFVLCRIR KKSSSENKNK 180 RKNSMIIGCD DDLVPPPLKN QKTNINNGNN IGYSSC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015880381.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015880381.1 | 1e-161 | NAC domain-containing protein 41-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 6e-15 | NAC domain containing protein 41 |