PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015878510.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 544aa    MW: 62172.6 Da    PI: 4.2147
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015878510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.45.9e-1931261128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     lp+GfrF P+d +l+ ++L++kv++ ++++ e + e+d+y   ePw++ +     +v ++ +++y F+k +k + +gkr nr + sg+W+     
  XP_015878510.1   3 LPRGFRFVPSDGDLI-YFLNEKVNAGQTTC-ELLGECDMYGNrEPWEIWNdngglSV-QKGEDLYLFTKLKKVSVNGKRINRRVGSGTWSGANCG 94 
                     799************.***********999.89*****99655*****643565333.356799*************************977664 PP

             NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      e+++     vg k+ + + ++  +   +  W+mhey+l
  XP_015878510.1  95 -ELVD----GVGEKRHFRYENNGGR--DHGAWIMHEYSL 126
                     .4444....49*******9854444..489*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.23E-222147IPR003441NAC domain
PROSITE profilePS5100522.2433147IPR003441NAC domain
PfamPF023654.3E-134126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MVLPRGFRFV PSDGDLIYFL NEKVNAGQTT CELLGECDMY GNREPWEIWN DNGGLSVQKG  60
EDLYLFTKLK KVSVNGKRIN RRVGSGTWSG ANCGELVDGV GEKRHFRYEN NGGRDHGAWI  120
MHEYSLLHNN HGDHGDDEYV LCRLRRKMSE AREQKRRKLM NNSNIIIHKE DDQIHLQSHD  180
HDYHHQSDHV QQAVAQVVLE EQTNNGGLMI KNNDNNDPNS DELLDYYLKL DEQEKWSLSL  240
SSSSSSNTGG GAAAYHMNNI IQAEQQNDQQ LGYYDNNSNN PIGFDDLIDL GVVFENIDDE  300
LTEIMKCDEV RVHKKSSSPS STGGAEINNN QLILEDQEGG QQDKPTNYYN SNTDYVVQLE  360
DDHQDDEALD HKLVKELEDL LELEIDHGDH DLMEISSEDF QAHMDHHHHQ AKMNYNQLLE  420
DEEVQYDKAT DKSNTTAAVG EDEDGALDKF AEKLEDILEL EIDPDFMEIN QANVDHNHHQ  480
VEGDQQQHII NEAADRQVLE IEDDNINNID GMSFAQDLQN IPLYFAPLPP DDQIEDILVD  540
LFNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-13115315171NO APICAL MERISTEM PROTEIN
1ut4_B1e-13115315171NO APICAL MERISTEM PROTEIN
1ut7_A1e-13115315171NO APICAL MERISTEM PROTEIN
1ut7_B1e-13115315171NO APICAL MERISTEM PROTEIN
3swm_A1e-13115318174NAC domain-containing protein 19
3swm_B1e-13115318174NAC domain-containing protein 19
3swm_C1e-13115318174NAC domain-containing protein 19
3swm_D1e-13115318174NAC domain-containing protein 19
3swp_A1e-13115318174NAC domain-containing protein 19
3swp_B1e-13115318174NAC domain-containing protein 19
3swp_C1e-13115318174NAC domain-containing protein 19
3swp_D1e-13115318174NAC domain-containing protein 19
4dul_A1e-13115315171NAC domain-containing protein 19
4dul_B1e-13115315171NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015878510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015878510.10.0NAC domain-containing protein 7-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.13e-18NAC domain containing protein 45