PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015875714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | NAC | ||||||||
Protein Properties | Length: 163aa MW: 17948.3 Da PI: 4.3431 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 44.4 | 5.3e-14 | 10 | 85 | 57 | 128 |
NAM 57 ewyfFskrdkkyatgkr.knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge...ktdWvmheyrl 128 ++fF++r+ +++ g+r nr +k+g+Wk tg d +v+++ g +v k+t++f + ++p++ +t+W+m+e+rl XP_015875714.1 10 GCHFFTRRRGTNEYGERmDNRDAKNGFWKCTGGDISVMDAAGLTVAYKQTFAFQERNSPTSFdfhSTNWTMDEFRL 85 68*******99998887257899*******************************888887634449********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.254 | 1 | 107 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.19E-16 | 10 | 106 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.6E-7 | 12 | 85 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MYKLDLEYGG CHFFTRRRGT NEYGERMDNR DAKNGFWKCT GGDISVMDAA GLTVAYKQTF 60 AFQERNSPTS FDFHSTNWTM DEFRLSAPHA GDDGTGLELV ACRVFKARFE DHGYFPNWNT 120 DPESDSDPTL PDPVNSDTNS EPPAVSESNS SGTSSSDSAN GGG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015875714.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015875714.2 | 2e-97 | uncharacterized protein LOC107412450 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 6e-10 | Arabidopsis NAC domain containing protein 87 |