PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015872364.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 338aa    MW: 37328.3 Da    PI: 4.5419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015872364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18115164154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s y+GVr +k +g+W+AeIrd +     + +r++lg++ t+eeA +a+++ ++++e
  XP_015872364.1 115 SPYRGVRMRK-WGKWAAEIRDpF-----KgARIWLGTYNTPEEASRAYENKKLEFE 164
                     68******99.**********55.....45********************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.73E-17115163IPR016177DNA-binding domain
SMARTSM003805.6E-18116185IPR001471AP2/ERF domain
PROSITE profilePS5103219.375116174IPR001471AP2/ERF domain
PfamPF008472.3E-11117165IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-22117164IPR001471AP2/ERF domain
CDDcd000186.71E-23117163No hitNo description
PRINTSPR003678.5E-10117128IPR001471AP2/ERF domain
PRINTSPR003678.5E-10139155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MPEPRKQSIN ISKNPIMVQI PSEEFKSMRK IRVICSDPDA TDSSSSEDEG EEVIKRRAIK  60
KCKRIVREIS LPPLHPQKAL EPEGSCQDSN HGGKTPCPKR RVLAKTTITK KTSSSPYRGV  120
RMRKWGKWAA EIRDPFKGAR IWLGTYNTPE EASRAYENKK LEFEAMAMAM ASSEKSNSTS  180
SSAVVSKSHN NNSSNNHSVS SEDSESVLSH ASPSSVLELE TSTSMSNSNV NGSDFVKEGV  240
DDTNLGGLEI PDFLLDEALA SLSFGEELNL NPGFDEPNLD DFGQFFSGFS SIEDVQIGGF  300
EDGEPSDLPD YDFEDLCNDD IASWMDEQQP QPRNISCV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015872364.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872364.10.0ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2P5DZ651e-115A0A2P5DZ65_PARAD; AP2/ERF transcription factor
STRINGEMJ238261e-110(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36900.12e-17related to AP2 10