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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_015872191.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family |
GRAS |
Protein Properties |
Length: 590aa MW: 64401.6 Da PI: 4.8015 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_015872191.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 454.1 | 9.1e-139 | 217 | 582 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lv+ Ll+cAeav++++l+la+al++++ las+++ +m+++a+yf+eALa+r++r +y p++ +++ s+ l++ f+e++P+lkf+h
XP_015872191.1 217 LVHSLLACAEAVQQENLKLADALVKHIGLLASSQAGAMRKVATYFAEALARRIYR----IY----PQDCLDSSYSDLLQM--HFYETCPYLKFAH 301
689****************************************************....44....444443335555444..5************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+taNqaIlea+++++rvH++Df+++qG+QWpaL+qaLa R++gpp +R+Tg+g+p+++++++l+++g +La++Ae++gv+fef+ +vak+l+dle
XP_015872191.1 302 FTANQAILEAFATADRVHVVDFGLKQGMQWPALMQALALRAGGPPAFRLTGIGPPQPDNTDALQQVGLKLAQLAETVGVEFEFRGFVAKSLADLE 396
*********************************************************************************************** PP
GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...e 280
+ +L+++p EalaVn+v++lhrll++++++e+ vL+ +k ++Pk+v+vveqea+hn++ Fl+rf+e+l+yys lfdsle++ + +
XP_015872191.1 397 PGMLDIRPadVEALAVNSVFELHRLLARPGAIEK----VLSSIKAMKPKIVTVVEQEASHNGPVFLDRFTESLHYYSNLFDSLESSSTTGLappS 487
********999***********************....*********************************************887443335779 PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
++ +++++lgr+i+nvvaceg er+erhetl +Wr+rl++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaW+
XP_015872191.1 488 QDLIMSEVYLGRQICNVVACEGPERFERHETLTQWRARLGSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIATSAWQ 582
999*******************************************************************************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0010218 | Biological Process | response to far red light |
GO:0042176 | Biological Process | regulation of protein catabolic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:2000033 | Biological Process | regulation of seed dormancy process |
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 590 aa
Download sequence Send
to blast |
MKRDYQDGCG SGGGSSNSVP VGKTKLWDEE QQEPGGAMDE LLAVLGYKVR ASDMAEVAQK 60 LEQLEMVMGS AQEDGISHLS DTVHYNPSDL SGWVQTMLTE LNTQPIDDES LLAPAESSTL 120 TSFDFSNSHH QIENQSRMVY NDDSEYDLRA IPGVAAFAPP QPQIESENTR KRLKTSIGST 180 SSSSPTPTQQ HVSVSVSGTE STRPMVLVDS QEAGVRLVHS LLACAEAVQQ ENLKLADALV 240 KHIGLLASSQ AGAMRKVATY FAEALARRIY RIYPQDCLDS SYSDLLQMHF YETCPYLKFA 300 HFTANQAILE AFATADRVHV VDFGLKQGMQ WPALMQALAL RAGGPPAFRL TGIGPPQPDN 360 TDALQQVGLK LAQLAETVGV EFEFRGFVAK SLADLEPGML DIRPADVEAL AVNSVFELHR 420 LLARPGAIEK VLSSIKAMKP KIVTVVEQEA SHNGPVFLDR FTESLHYYSN LFDSLESSST 480 TGLAPPSQDL IMSEVYLGRQ ICNVVACEGP ERFERHETLT QWRARLGSAG FDPVHLGSNA 540 FKQASMLLAL FAGGDGYRVE ENNGCLMLGW HTRPLIATSA WQLSESTQSN
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |