PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015871490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 229aa MW: 25551 Da PI: 9.4119 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.5 | 6.9e-14 | 116 | 174 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r +r+++NRe+ArrsR R+k++i+ L++ v +L++ N++L ++l +l + ++ +e+ XP_015871490.1 116 RRLKRMISNRESARRSRMRRKMQIDDLQTQVNQLQSTNRQLSEKLIQLLECNQQILQEN 174 689********************************************999999988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.4E-16 | 112 | 176 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.76 | 114 | 163 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.8E-12 | 115 | 170 | No hit | No description |
SuperFamily | SSF57959 | 1.19E-11 | 116 | 171 | No hit | No description |
Pfam | PF00170 | 1.5E-12 | 116 | 174 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.47E-17 | 117 | 165 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 119 | 134 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MEGNGSQGLN GQSLPIPSQS PRKISLTHPI SSPLNMQAVE AVEHHHSQPL LIPVLQNPSD 60 SISFCLSSLF PKSHIHAPIH DFSPNASSIS NDTTTPFDER ASEEHQRSNS IIMTERRLKR 120 MISNRESARR SRMRRKMQID DLQTQVNQLQ STNRQLSEKL IQLLECNQQI LQENVHLKEK 180 VSSLQIIVSD LLTPLRNVGN VVTSNTASLI KAAENPKPSV SASSMHLLH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015871490.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015871490.1 | 1e-164 | light-inducible protein CPRF2-like | ||||
TrEMBL | M5WVR4 | 6e-55 | M5WVR4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ10875 | 9e-56 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 3e-21 | basic leucine-zipper 70 |