PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT5G60830.1 | ||||||||
Common Name | AtbZIP70, bZIP70 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 206aa MW: 23914.7 Da PI: 6.9174 | ||||||||
Description | basic leucine-zipper 70 | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45 | 2.4e-14 | 69 | 129 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e +r+rr+ +NRe+ArrsR RKk++ieeL++ v++L N+ L +++ +l + + +e+ AT5G60830.1 69 EERRARRMVSNRESARRSRMRKKKQIEELQQQVEQLMMLNHHLSEKVINLLESNHQILQEN 129 678*******************************************999999988888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-14 | 67 | 131 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-12 | 69 | 129 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.358 | 69 | 132 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-11 | 71 | 123 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.9E-12 | 71 | 127 | No hit | No description |
CDD | cd14702 | 3.37E-17 | 72 | 123 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 74 | 89 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MESSSVHRSH CFDILDGVPL HDDHFNSAFL PNTDFNVHLQ SNVSTRINNQ SHLDPNAENI 60 FHNEGLAPEE RRARRMVSNR ESARRSRMRK KKQIEELQQQ VEQLMMLNHH LSEKVINLLE 120 SNHQILQENS QLKEKVSSFH LLMADVLLPM RNAESNINDR NVNYLRGEPS NRPTNSPFAS 180 STMIDAMYAT SDYYSSNYLL AFVCRY |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 18424401 | 0.0 | ||||
Expression Atlas | AT5G60830 | - | ||||
AtGenExpress | AT5G60830 | - |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT5G60830.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT5G60830 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB015472 | 0.0 | AB015472.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAE1. | |||
GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_200891.1 | 1e-151 | basic leucine-zipper 70 | ||||
TrEMBL | A0A178UEP1 | 1e-150 | A0A178UEP1_ARATH; BZIP70 | ||||
TrEMBL | F4K0H9 | 1e-150 | F4K0H9_ARATH; Basic leucine-zipper 70 | ||||
STRING | AT5G60830.1 | 1e-150 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6185 | 25 | 45 | Representative plant | OGRP11810 | 4 | 5 |
Link Out ? help Back to Top | |
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Phytozome | AT5G60830.1 |
Entrez Gene | 836204 |
iHOP | AT5G60830 |
wikigenes | AT5G60830 |