PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015870776.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 361aa    MW: 39942.5 Da    PI: 4.5088
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015870776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.71.4e-161711710128
             NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
                     td+el    L+k ++g++l+    +  ++ y+++P +Lp  v     +++fF + +++     + +r  +sg+Wk++g+  e++s +++ +g + 
  XP_015870776.1  17 TDKELF-MSLEKMMAGSPLPD--NVLPLNPYDIKPDNLP--V-----DIWFFNQPNEN-----KDTR--SSGRWKTKGEACELFS-NSSFIGWRS 93 
                     899999.55999999999877..577789*********9..2.....34566655443.....3456..489*************.999****** PP

             NAM 105 tLvfykgrapkgektdWvmheyrl 128
                     tL fy+g+ap+ +ktdWvm+ey +
  XP_015870776.1  94 TLEFYEGQAPHEHKTDWVMQEYWI 117
                     **********************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.7498139IPR003441NAC domain
PfamPF023651.4E-917115IPR003441NAC domain
SuperFamilySSF1019417.19E-2017138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MSLSKASPSA DISLYCTDKE LFMSLEKMMA GSPLPDNVLP LNPYDIKPDN LPVDIWFFNQ  60
PNENKDTRSS GRWKTKGEAC ELFSNSSFIG WRSTLEFYEG QAPHEHKTDW VMQEYWITLR  120
LSEDVSAMGP CSLCRVFLVQ NADTASHSTE SVVQNAENYV GQSSSSRQQV NETGNLSVRE  180
RIPVENAPEI DYVSRGDYME LLDLDTPVSP SSSSDSSCVT MSSNECFDSL ALLQDLEPET  240
NNEPVQKDAG CKFNIAASIK PTEVVICPAF SGTLDKSPNE QVPWTDRSTP GSALLSQISD  300
KNNLKNPSGN QKPDFRNEGT SSNSERLAAT CSSYMAAPRE EKKPSIARKG SLKKYCCCLP  360
F
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015870776.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015870518.10.0NAC domain-containing protein 83-like
RefseqXP_015870655.10.0NAC domain-containing protein 83-like
RefseqXP_015870776.10.0NAC domain-containing protein 83-like
RefseqXP_015871029.10.0NAC domain-containing protein 83-like
RefseqXP_015871167.10.0NAC domain-containing protein 83-like
RefseqXP_015871337.10.0NAC domain-containing protein 83-like
RefseqXP_015871483.10.0NAC domain-containing protein 83-like
RefseqXP_015871536.10.0NAC domain-containing protein 83-like
TrEMBLA0A2P5FZE71e-113A0A2P5FZE7_TREOI; NAC domain containing protein
STRINGXP_010106034.11e-110(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-16NAC domain containing protein 83