PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015869040.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 143aa    MW: 16226.2 Da    PI: 9.1085
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015869040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.33.9e-14462563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +r+++NRe+ArrsR RK++ ++ L+  v++L++ N + k +++   k+  + +se+
  XP_015869040.1  4 RKRKRMISNRESARRSRMRKQKHLDDLTAQVAKLTKDNNEIKTNIDITAKHFLTIESEN 62
                    6789****************************************999988888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.4E-16164IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.634265IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-11378No hitNo description
PfamPF001701.3E-11462IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-12455No hitNo description
CDDcd147024.96E-19555No hitNo description
PROSITE patternPS000360722IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MDQRKRKRMI SNRESARRSR MRKQKHLDDL TAQVAKLTKD NNEIKTNIDI TAKHFLTIES  60
ENSILRAQVG ELSHRLQSLD EIIRFLNANN YNDVFGSAGG ADYSTTSSGT SSFNEPIVDS  120
FFNPLNLSYL NQPIVASAEL FQC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324RKRKRMISNRESARRSRMRKQK
21623RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015869040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015869040.11e-102bZIP transcription factor 11-like
SwissprotC0Z2L55e-45BZP44_ARATH; bZIP transcription factor 44
TrEMBLW9SFP22e-61W9SFP2_9ROSA; Ocs element-binding factor 1
STRINGXP_010105351.14e-62(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-47basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]