PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015868683.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 335aa    MW: 38842.2 Da    PI: 6.6159
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015868683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM140.31.2e-43542002128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......................kvka..eekewyfFskrdkkyatgk 72 
                      pGf FhPtde lv++yLkkkv++++l+  ++i++v++yk++P  L +                      +  +   +k+wyfF++r++ky++g+
  XP_015868683.1  54 IPGFSFHPTDELLVNFYLKKKVANEQLPS-NFIHDVELYKSNPDYLAEkllvstnmqlmnnieiykhaenH--EpqVDKQWYFFTPRERKYPNGE 145
                     59**************************9.89**************8458999999999999887654431..133566**************** PP

             NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     r+nra+ +gyWk t +dk+v+s +++++g kk Lvfy+g+ap+g+kt+W+mheyrl
  XP_015868683.1 146 RANRAAGDGYWKGTISDKPVVS-NKNTIGFKKALVFYQGKAPNGVKTNWMMHEYRL 200
                     **********************.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.54E-4752226IPR003441NAC domain
PROSITE profilePS5100548.85453226IPR003441NAC domain
PfamPF023651.1E-2455200IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MDVHQNQDLI ENPSNNGDNN SSSSLNSPPP TNNENLHPHE QPGTVYCEHV RSYIPGFSFH  60
PTDELLVNFY LKKKVANEQL PSNFIHDVEL YKSNPDYLAE KLLVSTNMQL MNNIEIYKHA  120
ENHEPQVDKQ WYFFTPRERK YPNGERANRA AGDGYWKGTI SDKPVVSNKN TIGFKKALVF  180
YQGKAPNGVK TNWMMHEYRL NRPTKRKMID NDMRLDDLVL CRIYKRPPSK NERKVEENEA  240
LIASSSQNHN SHNNNPNPHY PELQRINIHQ NPNFMEHQHP PIPPLPPATY FQQHDPDSTN  300
RNPDLAMDDN VFGGLEPLSP SWYLSTGITY EDIWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-505522417166Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015868683.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015868683.10.0protein ATAF2-like
TrEMBLR4N7R62e-54R4N7R6_JATCU; NAC transcription factor 057
STRINGEOY327092e-54(Theobroma cacao)
STRINGSolyc11g065540.1.11e-54(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41033262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.11e-53NAC family protein