PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015868214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | TALE | ||||||||
Protein Properties | Length: 703aa MW: 76099.7 Da PI: 7.6074 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.2 | 1.6e-09 | 399 | 436 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_015868214.1 399 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 436 554459******************************88 PP | |||||||
2 | BELL | 124.6 | 3.8e-40 | 263 | 334 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+s+l+eVd+rY+qy++q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi XP_015868214.1 263 ERQEIQMKKAKLISMLDEVDQRYRQYHQQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQI 334 79*********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 7.1E-66 | 188 | 332 | IPR006563 | POX domain |
Pfam | PF07526 | 8.1E-50 | 193 | 331 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.309 | 377 | 440 | IPR001356 | Homeobox domain |
SMART | SM00389 | 5.3E-9 | 380 | 444 | IPR001356 | Homeobox domain |
CDD | cd00086 | 4.70E-12 | 380 | 441 | No hit | No description |
SuperFamily | SSF46689 | 8.98E-17 | 381 | 446 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.0E-28 | 383 | 446 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.9E-18 | 397 | 436 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 703 aa Download sequence Send to blast |
MATYFHGNSE IQAADGLQTL VLMNPAGYVP YSDTPPPPPT AASNLIFLNS PNSLTHPPAN 60 LTHAPQSHTQ QFVGIPLPST ASSQDPHSQS MHAHHHHEQL SALHGLMPRL QYNLWNSIDP 120 STAARETPRA QQGLSLSLSS QQPGYGSFRG GDREVAAPQS QAQAISGEDM RVSGGSASSV 180 SGVTNGVSGM QSVLLSSKYL KAAQELLDEV VNVGNGIRTE TSKKNGGQQS KIMGGESLAA 240 VSCDGSVGGE GSGKRAADLS TAERQEIQMK KAKLISMLDE VDQRYRQYHQ QMQIVISSFE 300 QAAGIGSART YTALALQTIS KQFRCLKDAI TGQIRAANKS LGEEDCLGGK IEGSRLKYVD 360 HHLRQQRALQ QLGMIQQNAW RPQRGLPERS VSVLRAWLFE HFLHPYPKDS DKHMLAKQTG 420 LTRSQVSNWF INARVRLWKP MVEEMYLEEI KEQEQNGSAD KLSKSNEDSG SKSTAPQEKS 480 TTENQTTSFN SKQENSTTQN GPPGISISTP STSPTGGNAR NHSGFSLIGS SALEGIGIAQ 540 GSPKKPRSTE MLHSPNGVPS IGMDIKPGEV NNDQISIKFG DERQSRDGYS FMGSQTNFIG 600 GFGQYPIGEI GRFDAEQFTP RFSGNGVSLT LGLPHCENLS LSGAHQSFLP NQNIQLGRRV 660 DIGEANEFGS LNTPTPHSSA AFENINIQNR KRFAAQLLPD FVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 4e-16 | 386 | 444 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 4e-16 | 386 | 444 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 4e-16 | 386 | 443 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 4e-16 | 386 | 443 | 1 | 58 | Homeobox protein Meis1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015868214.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015868214.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868215.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868216.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868217.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868218.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900418.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900419.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900420.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900421.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900422.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900424.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 0.0 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A2N9GIG5 | 0.0 | A0A2N9GIG5_FAGSY; Uncharacterized protein | ||||
STRING | EMJ05449 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1627 | 34 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-165 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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