PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_015867010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Family | bZIP | ||||||||
Protein Properties | Length: 364aa MW: 40093 Da PI: 6.4137 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.1 | 4.4e-14 | 254 | 316 | 2 | 64 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 + ++errkq+NRe+A+rsR R+++e+ +L+ ++ L +e + L+ + + +ke+ klk+e++ XP_015867010.1 254 HDQRKERRKQSNRESAKRSRCRRQEECRKLQGTAEDLAKETSNLRAGIMRVSKECRKLKKENK 316 57799*******************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.1E-9 | 30 | 103 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 2.4E-12 | 251 | 313 | No hit | No description |
SMART | SM00338 | 6.8E-12 | 253 | 317 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.346 | 255 | 318 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.3E-12 | 256 | 316 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-6 | 257 | 308 | No hit | No description |
CDD | cd14702 | 5.50E-14 | 258 | 309 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 260 | 275 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence Send to blast |
MGTNEANGVV KPFQLIGDRE VNVNANSLEQ LVSTQNVPIA PSRSDWPTHA QAFYPYGATP 60 HHFFTSRASV SPSFYPAYMV GNQHQIMQLY GTPVQYSAQY GHNQPPSYPN GAVFTVPQKE 120 ANPSEKDLGS MRKCKRSSEN EYLTGNRLGE SGNRTLPLRN DGDGALQSAP IGTEGLSDET 180 CNTDRDFSAA KKQRYNQRLV DGAVAQTDAT LQYHDVNADS GLQDSAVNMV QTKSNTGIAS 240 NWSSTKTILA KEEHDQRKER RKQSNRESAK RSRCRRQEEC RKLQGTAEDL AKETSNLRAG 300 IMRVSKECRK LKKENKSIMK GLEKMYGPDA VGDLKAEEPG SVNGDGESSS DESGNETSDE 360 DEDA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_015867010.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015867010.1 | 0.0 | G-box-binding factor 1-like | ||||
Refseq | XP_024924421.1 | 0.0 | G-box-binding factor 1-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15757 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 4e-42 | G-box binding factor 1 |