PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015866872.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 364aa    MW: 40093 Da    PI: 6.4137
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015866872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.14.4e-14254316264
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                      + ++errkq+NRe+A+rsR R+++e+ +L+  ++ L +e + L+  + + +ke+ klk+e++
  XP_015866872.1 254 HDQRKERRKQSNRESAKRSRCRRQEECRKLQGTAEDLAKETSNLRAGIMRVSKECRKLKKENK 316
                     57799*******************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.1E-930103IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.4E-12251313No hitNo description
SMARTSM003386.8E-12253317IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346255318IPR004827Basic-leucine zipper domain
PfamPF001705.3E-12256316IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-6257308No hitNo description
CDDcd147025.50E-14258309No hitNo description
PROSITE patternPS000360260275IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MGTNEANGVV KPFQLIGDRE VNVNANSLEQ LVSTQNVPIA PSRSDWPTHA QAFYPYGATP  60
HHFFTSRASV SPSFYPAYMV GNQHQIMQLY GTPVQYSAQY GHNQPPSYPN GAVFTVPQKE  120
ANPSEKDLGS MRKCKRSSEN EYLTGNRLGE SGNRTLPLRN DGDGALQSAP IGTEGLSDET  180
CNTDRDFSAA KKQRYNQRLV DGAVAQTDAT LQYHDVNADS GLQDSAVNMV QTKSNTGIAS  240
NWSSTKTILA KEEHDQRKER RKQSNRESAK RSRCRRQEEC RKLQGTAEDL AKETSNLRAG  300
IMRVSKECRK LKKENKSIMK GLEKMYGPDA VGDLKAEEPG SVNGDGESSS DESGNETSDE  360
DEDA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015866872.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015867010.10.0G-box-binding factor 1-like
RefseqXP_024924421.10.0G-box-binding factor 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1575779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.24e-42G-box binding factor 1