PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015865622.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bZIP
Protein Properties Length: 367aa    MW: 39447.3 Da    PI: 6.3252
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015865622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.71.9e-21263325163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN  L++e+++++ e+++l se+
  XP_015865622.1 263 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENANLRSEVNRIRSEYEQLLSEN 325
                     89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.5E-28197IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165967.0E-28137206No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-17257321No hitNo description
SMARTSM003381.5E-21263327IPR004827Basic-leucine zipper domain
PfamPF001703.0E-20263325IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.426265328IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.31E-11266322No hitNo description
CDDcd147023.27E-23268318No hitNo description
PROSITE patternPS000360270285IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MGSSEMDKPA KEKEKDSKTA PTTTQDQSSA TSTGAVNADW SGFQAYSPIP PPGFLASSPQ  60
AHPYMWGVQH IMPPYGTPPH PYVAMYPHGV YAHPSMPPGS YPFSPFAMPS PNGIAEASGN  120
TTPGSMEADG RPTEVKEKLP IKRSKGSLGS LNMITGKNNE HGKTSGASAN GAYSKSAESG  180
SEGTSDGSDV NSQDDSQLKS GCGQDSLEVP GPATNLNIGM DYWSAQAASP IPAMRGKVPS  240
TPVAGGIVTA GSRDSAQLWL QDERELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEAL  300
KEENANLRSE VNRIRSEYEQ LLSENASLKE RLGEVPAHDD LRSSRNDQHL SNDAQQTGSQ  360
TEMSSDR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279285RRSRLRK
2279286RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015865622.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015865622.10.0bZIP transcription factor 16-like isoform X2
SwissprotQ501B21e-153BZP16_ARATH; bZIP transcription factor 16
TrEMBLW9R1Z80.0W9R1Z8_9ROSA; Transcription factor HBP-1a
STRINGXP_010088657.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-143basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]