PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc03075.1.g00010.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family C2H2
Protein Properties Length: 276aa    MW: 29439.3 Da    PI: 10.0377
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc03075.1.g00010.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.5e-053758223
                                  EETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                  +C  C+++F ++  L  H+r H
  Zjn_sc03075.1.g00010.1.am.mk 37 TCRLCSRRFASPRALAGHMRAH 58
                                  6*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.5773659IPR007087Zinc finger, C2H2
SMARTSM003550.0353658IPR015880Zinc finger, C2H2-like
PfamPF138942.3E-43758No hitNo description
SuperFamilySSF576679.13E-73758No hitNo description
PROSITE patternPS0002803858IPR007087Zinc finger, C2H2
SuperFamilySSF576679.13E-7188212No hitNo description
PfamPF139126.0E-10192217IPR007087Zinc finger, C2H2
PROSITE profilePS501578.517193222IPR007087Zinc finger, C2H2
SMARTSM0035555193213IPR015880Zinc finger, C2H2-like
PfamPF139122.8E-7257276IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
CRASSNGKGR SKSSRRWEPH FLAGIRVLQA LAMAKNTCRL CSRRFASPRA LAGHMRAHSI  60
AAAKSQISSA SSASTSVVAG GGAEKPVQGY VLREKPKRRV RLAESDISDS ESETSGFPSS  120
WPSAKHGHAA GSGDAEPVSS VSNGVTPEQD VAMLLVMLSR DSWPLPPVMP SYQVDSDDEC  180
DARQPIAQKR TRYECPACKK AFRSYQALGG HRASNVRGGK GGCCAPPPPL YTPPPSPMQP  240
LLARDGEEGG AWKPLPHQCP HCFRVFSSGQ ALGGHR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100KPKRRVR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006652618.13e-84PREDICTED: zinc finger protein ZAT1-like
TrEMBLA0A3L6Q7114e-89A0A3L6Q711_PANMI; Zinc finger protein ZAT1-like
STRINGOPUNC04G18700.15e-86(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35183377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.14e-19C2H2-like zinc finger protein