PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00122.1.g00160.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 254aa MW: 27069.5 Da PI: 9.763 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54.1 | 3.5e-17 | 181 | 232 | 3 | 54 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+ Zjn_sc00122.1.g00160.1.am.mk 181 SDRRKKRMIKNRESAARSRARKQAYVRELEKEVKLLQQENQSLRVKYEQLRV 232 689******************************************9999975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-13 | 179 | 248 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.99 | 181 | 231 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-15 | 182 | 233 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.32E-22 | 183 | 230 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.4E-15 | 183 | 234 | No hit | No description |
SuperFamily | SSF57959 | 1.75E-12 | 183 | 232 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 186 | 201 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
LWLGPGLLKP ASQPASRAPL WPCGAPLRAQ NKQGERSPTD RAPFGVMAAM DMDDDEDIWA 60 NSPSPSASPP RSAACGFIST QLSLNSHLHL LSSSAADAGG VHGGSPTDHS VGDGIFAADG 120 GFRHQAGVSG GFRNVAASSF FPYGVDAVPA PYDSDAARSA LEHEMCLGPA AAAWAGSVAG 180 SDRRKKRMIK NRESAARSRA RKQAYVRELE KEVKLLQQEN QSLRVKYEQL RVSVEVPVPT 240 PVKKTLRRMP SAPF |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF093789 | 1e-63 | EF093789.1 Zea mays delayed flowering1 (DLF1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004957504.1 | 7e-80 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | K3ZWU5 | 1e-78 | K3ZWU5_SETIT; Uncharacterized protein | ||||
STRING | Si031077m | 3e-79 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 3e-12 | basic region/leucine zipper motif 27 |