PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00120.1.g00280.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family EIL
Protein Properties Length: 440aa    MW: 46954.3 Da    PI: 5.2489
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00120.1.g00280.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN364.14.1e-20130233132232
                                   ----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--....-----GGG--HHHHHHH CS
                          EIN3 132 eshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg...tppykkphdlkkawkvsv 209
                                    s  l +l  Ttl  +Ls lm  c+pp r+++   g +p WWPt +e ww++l +++  +   + p+   + lkk+++v+v
  Zjn_sc00120.1.g00280.1.am.mk 130 LSAALDQLHSTTLARMLSELMAVCQPPVRQYESRSGAPPRWWPTASESWWASLVAAHLPRiptPVPFVGGKLLKKVHRVAV 210
                                   5678999********************************************888777777877779999999********* PP

                                   HHHHHHHTGGGHHHHHHTTTTSS CS
                          EIN3 210 Ltavikhmsptieeirelerqsk 232
                                   L a +kh+sp+++ i   +r+ +
  Zjn_sc00120.1.g00280.1.am.mk 211 LVAIVKHLSPDFAPIASAVRRCR 233
                                   ***************99998754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.2E-22126233No hitNo description
Gene3DG3DSA:1.10.3180.102.7E-33130252IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-30132251IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MVWASAGTGF TLHGKRKKRT ARSAPRDGVA VPAMAFPVTG VSGAASRWST AAVLEASRRA  60
AELPPSPAMV GALLGAARNA MALSAQQKSI SEAPLVFAHA AGQLVPVPIR FYGYMPMASM  120
STSSGAPLPL SAALDQLHST TLARMLSELM AVCQPPVRQY ESRSGAPPRW WPTASESWWA  180
SLVAAHLPRI PTPVPFVGGK LLKKVHRVAV LVAIVKHLSP DFAPIASAVR RCRLPASEAT  240
LWNSALENEL ACCVRPVYIV QMQQQGCLLP PSHAVAANDG VNPPADNGDQ VVVGAEELVK  300
PPQEQHSSVA LPADDYQQVA NLTGDGGAHV VTAPSYEILQ VATTEAEPDK SQPEQEGDVD  360
ASVFAPSDLL QLEDMPLPLS AEQADDDLHQ PADHFGKDFG AAAEVEGPED RPWYEDKELR  420
RIFADMPIGS PHSFDDGWFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-1913324911128ETHYLENE-INSENSITIVE3-like 3 protein
4zds_A2e-191332585131Protein ETHYLENE INSENSITIVE 3
4zds_B2e-191332585131Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGSb02g006580.13e-36(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15037818
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.13e-21ETHYLENE-INSENSITIVE3-like 3