PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00092.1.g00060.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 319aa    MW: 34477.7 Da    PI: 5.237
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00092.1.g00060.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.97.3e-18742062127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdL.pkkvkaeekewyfFskrdkkya..tgkrknrat 78 
                                   ppG+ F+Ptdeel++ yL +++ ++   l  v i++    +++Pw+L p +   ++   +f+++ +++++  +  r +r  
  Zjn_sc00092.1.g00060.1.am.mk  74 PPGLIFDPTDEELIMLYLLPRTCDQADALPGViIDDDAAANTQPWKLfPVRGLPDDLPAFFYVRDNNEERppHAPRGRRCD 154
                                   8********************9999977777758888999*******5444434566889999888777644677999999 PP

                           NAM  79 ksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127
                                     g Wk + ++++  ++      +++  ++k+ L +      +g+ t Wvm+ey 
  Zjn_sc00092.1.g00060.1.am.mk 155 GGGSWKIQKRERKDAAShvlrvgGESIRWTKNKLKLS---VGTGTTTGWVMQEYF 206
                                   9*****8888776555547777666678999999998...556778********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-2271220IPR003441NAC domain
PROSITE profilePS5100521.68573249IPR003441NAC domain
PfamPF023653.5E-1274205IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MYNGTAMLDG ASGSYAVAAL PGPASLDPPL ALAPPTSSAR ARASICTTPP LLAPQEIRSK  60
HTMLVAKLFG DDHPPGLIFD PTDEELIMLY LLPRTCDQAD ALPGVIIDDD AAANTQPWKL  120
FPVRGLPDDL PAFFYVRDNN EERPPHAPRG RRCDGGGSWK IQKRERKDAA SHVLRVGGES  180
IRWTKNKLKL SVGTGTTTGW VMQEYFVDDH PSLRVCRISF AGRGEKRPRL QPDDSSVPGE  240
PVTRRLRVVA AAADSGSANC TTTSLDHQKP GTADASEGQE RCQSALGVAA MPNQEIQDSF  300
GKIQEFTDAL EDDEEPHGS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-12NAC domain containing protein 83