PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00088.1.g00510.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 341aa    MW: 36056.6 Da    PI: 8.2122
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00088.1.g00510.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.62.6e-49231552128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrk 74 
                                    pGfrFhPtd+elv +yLk+kve+k +++ ++ike+d+yk++PwdLp+        +  a+ekewyfF+ r +ky++++r+
  Zjn_sc00088.1.g00510.1.sm.mk  23 FPGFRFHPTDQELVGFYLKRKVERKGFSI-DIIKEIDVYKHDPWDLPSeawpvvlaQGGAGEKEWYFFCLRGRKYRNSTRP 102
                                   69***************************.99**************95589988765556899****************** PP

                           NAM  75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   nr+t sg+Wkatg dk++++ +g+ vglkk+L++y g+a kg+ktdW+mhe+rl
  Zjn_sc00088.1.g00510.1.sm.mk 103 NRVTGSGFWKATGIDKPIHD-GGQCVGLKKSLIYYVGSAGKGTKTDWMMHEFRL 155
                                   ********************.9******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-5122158IPR003441NAC domain
PROSITE profilePS5100547.19822195IPR003441NAC domain
PfamPF023653.7E-2424155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MEKKPMEESG STGVGGNEDD LVFPGFRFHP TDQELVGFYL KRKVERKGFS IDIIKEIDVY  60
KHDPWDLPSE AWPVVLAQGG AGEKEWYFFC LRGRKYRNST RPNRVTGSGF WKATGIDKPI  120
HDGGQCVGLK KSLIYYVGSA GKGTKTDWMM HEFRLRAATS SVDFHDAHKT NQTHMAAETQ  180
ATASGSNTLA ATFPKLLAGA APKYSGPLYP YVPGPNPPGP PNHPPPNPRL PALGHSSGVG  240
TGSADPTSAA GSYAPPPPPA AGWYSPPPPA AGWYSPPPAA GSGNFLEAVV LAPADDDGGR  300
AVVVAAAGCV APGPADAWSP VDRAPCTHSL RNANLCRAGM S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-472415519142NO APICAL MERISTEM PROTEIN
1ut4_B7e-472415519142NO APICAL MERISTEM PROTEIN
1ut7_A7e-472415519142NO APICAL MERISTEM PROTEIN
1ut7_B7e-472415519142NO APICAL MERISTEM PROTEIN
3swm_A8e-472415522145NAC domain-containing protein 19
3swm_B8e-472415522145NAC domain-containing protein 19
3swm_C8e-472415522145NAC domain-containing protein 19
3swm_D8e-472415522145NAC domain-containing protein 19
3swp_A8e-472415522145NAC domain-containing protein 19
3swp_B8e-472415522145NAC domain-containing protein 19
3swp_C8e-472415522145NAC domain-containing protein 19
3swp_D8e-472415522145NAC domain-containing protein 19
4dul_A7e-472415519142NAC domain-containing protein 19
4dul_B7e-472415519142NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119138129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-71NAC domain containing protein 42