PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00085.1.g01200.1.am.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 322aa    MW: 34945.5 Da    PI: 7.3469
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00085.1.g01200.1.am.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-11162190533
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                                     k  rr+++NReAAr+sR+RKka+i++Le+
  Zjn_sc00085.1.g01200.1.am.mkhc 162 KILRRLAQNREAARKSRLRKKAYIQQLET 190
                                     6789***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-8156200No hitNo description
SMARTSM003384.6E-6158223IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.577160204IPR004827Basic-leucine zipper domain
PfamPF001701.1E-8162191IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.9E-7163203No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
PfamPF141445.2E-27246320IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MGGSGGEEEH HHHRQPSDLP MCIQIAAAPP TMIASSTMSK ESASSYDMAD FDQSAIFLYL  60
DGHDQEQRQT LNIFPSQPMH AAEPIPAKGG NMGMVTTMLA NGNLSSPKGQ EQGSQRSLDP  120
SPGPSVTAPK ETKSGVTIAK KEATSSGNGG GSSGQERARD PKILRRLAQN REAARKSRLR  180
KKAYIQQLET SRIRLSQLEQ HVQTARVQGV FSGTGGQLGF LSASSPAPAM FDIEYGRWIE  240
EHSKLMFQLR AALDEPLLAD DQLQAFVNGA MAQHEELLNL KGAIARADVF HLLSGVWANP  300
AERCFLWLGG FRPSEVIKVL CL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524003e-52AK252400.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf157i09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698769.11e-153transcription factor TGAL7 isoform X1
SwissprotQ6H4341e-120TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLA0A1E5WJ131e-158A0A1E5WJ13_9POAL; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRINGSi029966m1e-151(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-72bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]