PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00078.1.g01760.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 312aa    MW: 33641.4 Da    PI: 10.1163
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00078.1.g01760.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.55.8e-28171621128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 
                                   lppGfrF+Ptdeelvv+yL++k+ g +l++  vi+ v d+y ++Pwd+p    a++ e yfF+ r  ++ + + ++ +t  
  Zjn_sc00078.1.g01760.1.am.mk  17 LPPGFRFKPTDEELVVQYLRRKAFGAPLPA-AVIPVVrDLYGLDPWDIP---GASDGEKYFFAIRPAASGHVELPRGKTGg 93 
                                   79****************************.8899999***********...3467899******9998855444444323 PP

                           NAM  80 .......sgyWkatgkdkevlsk.....kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                                          sg+Wk  gk ++v+       ++ lvg+++ L+f         k+ ap g  + Wvmheyrl
  Zjn_sc00078.1.g01760.1.am.mk  94 sggatpaSGRWKPDGKGRPVVLPrpcggGSLLVGVRRALAFAplrgkkntKQAAPAGLTAGWVMHEYRL 162
                                   33333459*************99899877777**********9998887778899999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3211168IPR003441NAC domain
PROSITE profilePS5100537.97917235IPR003441NAC domain
PfamPF023656.2E-1818162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MERAPVLVRH AGGVATLPPG FRFKPTDEEL VVQYLRRKAF GAPLPAAVIP VVRDLYGLDP  60
WDIPGASDGE KYFFAIRPAA SGHVELPRGK TGGSGGATPA SGRWKPDGKG RPVVLPRPCG  120
GGSLLVGVRR ALAFAPLRGK KNTKQAAPAG LTAGWVMHEY RLAAALLHKN LVPRMCDDLF  180
AVCLSHCRRS CCVACMSGSN GWFIHWYQIV PISSSRDRSA ETTEGEWVVC RVFRKSRQQQ  240
PRRRDQAVPA GDGTVPRRTM TSLSAASSAS CVTDGSDQDD EVSSQRSSEL DKRPATHGQG  300
LLALRGDYNS LA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-2091627140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004974022.11e-78NAC domain-containing protein 18
TrEMBLK3YJI92e-77K3YJI9_SETIT; Uncharacterized protein
STRINGSi014408m4e-78(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118183140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.14e-29NAC domain containing protein 41