PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00078.1.g00640.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 204aa    MW: 22451.9 Da    PI: 10.3997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00078.1.g00640.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.31.9e-134388756
                           AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                  r+++ +grW+Ae+r+p++   r r ++g+f t++eAa a++aa  +++ge
  Zjn_sc00078.1.g00640.1.sm.mk 43 RRRE-WGRWAAELRVPRK---RERLWIGTFATPKEAAHAYDAAIFCFYGE 88
                                  5555.**********954...5**********************999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.2843899IPR001471AP2/ERF domain
SMARTSM003807.0E-1938105IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-153999IPR016177DNA-binding domain
PRINTSPR003674.4E-63950IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-2240100IPR001471AP2/ERF domain
CDDcd000186.02E-1940101No hitNo description
PfamPF008474.8E-84387IPR001471AP2/ERF domain
PRINTSPR003674.4E-66177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MAATALSSSE AATKGKKARR RRGRRSSAMT MAMPKNLGWV GARRREWGRW AAELRVPRKR  60
ERLWIGTFAT PKEAAHAYDA AIFCFYGEHI PKIRKLNFPT APRPDISEHV RVRLTMANIR  120
AIAEKYAHAL TNYIPPPPPP VVPEAAPQVV VVVPPPVDAS IGSAPTANYG NVNEAGVDIL  180
TVADCLLSFN PDDFDEIMHF ANTA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-13ERF family protein