PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00068.1.g03510.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 305aa MW: 34131.7 Da PI: 6.6342 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.4 | 1.8e-46 | 10 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgy 82 pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++Pw+Lp + +e+ewyfF++rd+k at g r++r+t++g+ Zjn_sc00068.1.g03510.1.sm.mk 10 PGFRFHPTEEELLEFYLKQVVQGKKLKF-DIIPTVHLYRHDPWELPGLSRIGEREWYFFVPRDRKLATgGGRPSRTTERGF 89 9**************************9.99***************7777899************998678********** PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d++v ++ ++l+glkktLv+y+grap+g++tdWvm+eyrl Zjn_sc00068.1.g03510.1.sm.mk 90 WKATGSDRAVRCAadPKRLIGLKKTLVYYEGRAPRGTRTDWVMNEYRL 137 ***********98777788***************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 52.077 | 8 | 185 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.88E-51 | 9 | 185 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-24 | 10 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 305 aa Download sequence Send to blast |
MSGAAELELP GFRFHPTEEE LLEFYLKQVV QGKKLKFDII PTVHLYRHDP WELPGLSRIG 60 EREWYFFVPR DRKLATGGGR PSRTTERGFW KATGSDRAVR CAADPKRLIG LKKTLVYYEG 120 RAPRGTRTDW VMNEYRLPDS IAGAGEDSYT SYVDVEHAKS LTLTESASES SLLPEDIVLC 180 KIYRKAVSLK ELEQRVAMEE LARATATPSA SHSTGSSADS ISSSEPHPHS CQVMATTEMK 240 KEETDACAVV KPATLSLPRL EVGKPSQQQI GGLGAAEWMQ DPFLTQLRSP WMEAWSPYYA 300 SVLNF |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-44 | 5 | 185 | 11 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004966508.1 | 1e-146 | NAC domain-containing protein 67 | ||||
Swissprot | Q10S65 | 1e-100 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A194YLW2 | 1e-144 | A0A194YLW2_SORBI; Uncharacterized protein | ||||
TrEMBL | K3XYI6 | 1e-144 | K3XYI6_SETIT; Uncharacterized protein | ||||
STRING | Si006994m | 1e-145 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-78 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
---|---|---|---|
|